Krtap16-3 keratin associated protein 16-3 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Krtap16-3provided by MGI
Official Full Name: keratin associated protein 16-3provided by MGI
Primary source: MGI:MGI:1918619
See related: Ensembl:ENSMUSG00000096534 AllianceGenome:MGI:1918619
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Krtap16-10; 5430404J20Rik
Summary: Predicted to be located in intermediate filament. Orthologous to several human genes including KRTAP19-1 (keratin associated protein 19-1); KRTAP19-3 (keratin associated protein 19-3); and KRTAP19-4 (keratin associated protein 19-4). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:: 16 C3.3; 16 51.42 cM

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	16	NC_000082.7 (88759192..88759761, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	16	NC_000082.6 (88962304..88962873, complement)

Chromosome 16 - NC_000082.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Krtap16 is a hair keratin-associated protein gene complex regulated by Hoxc13; localized to chromosome 16
Title: Krtap16, characterization of a new hair keratin-associated protein (KAP) gene complex on mouse chromosome 16 and evidence for regulation by Hoxc13.

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General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
located_in intermediate filament	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: keratin-associated protein 16-3

Names: keratin-associated protein 16.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_183296.1 → NP_899119.1 keratin-associated protein 16-3

See identical proteins and their annotated locations for NP_899119.1

Status: PROVISIONAL

Source sequence(s)

AK017265

Consensus CDS

CCDS79478.1

UniProtKB/Swiss-Prot

Q3B7Z5, Q8C1I6, Q925H8

Related

ENSMUSP00000139557.2, ENSMUST00000179707.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

NC_000082.7 Reference GRCm39 C57BL/6J

Range

88759192..88759761 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NM_130872.3: Suppressed sequence

Description

NM_130872.3: This RefSeq was temporarily suppressed because currently there is not sufficient data to support this transcript.