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1700030N03Rik RIKEN cDNA 1700030N03 gene [ Mus musculus (house mouse) ]

Gene ID: 70011, updated on 8-Feb-2024

Summary

Official Symbol
1700030N03Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700030N03 geneprovided by MGI
Primary source
MGI:MGI:1917261
See related
Ensembl:ENSMUSG00000100969 AllianceGenome:MGI:1917261
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700087C08Rik
Expression
Restricted expression toward testis adult (RPKM 30.3) See more
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Genomic context

Location:
19 A; 19
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (3203799..3247703, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (3153799..3197703, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 38527 Neighboring gene STARR-seq mESC enhancer starr_45310 Neighboring gene predicted gene, 25431 Neighboring gene STARR-seq mESC enhancer starr_45311 Neighboring gene synaptojanin-2-binding protein pseudogene Neighboring gene predicted gene, 57663 Neighboring gene STARR-seq mESC enhancer starr_45312 Neighboring gene cytochrome c oxidase subunit VIa polypeptide 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_45313 Neighboring gene Crn, crooked neck-like 1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045304.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK007025
    Related
    ENSMUST00000190259.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    3203799..3247703 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)