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Mzb1 marginal zone B and B1 cell-specific protein 1 [ Mus musculus (house mouse) ]

Gene ID: 69816, updated on 5-Mar-2024

Summary

Official Symbol
Mzb1provided by MGI
Official Full Name
marginal zone B and B1 cell-specific protein 1provided by MGI
Primary source
MGI:MGI:1917066
See related
Ensembl:ENSMUSG00000024353 AllianceGenome:MGI:1917066
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PACAP; pERp1; 2010001M09Rik
Summary
Involved in several processes, including integrin activation; positive regulation of immunoglobulin production; and regulation of B cell proliferation. Located in endoplasmic reticulum lumen and extracellular region. Part of endoplasmic reticulum chaperone complex. Is expressed in thymus primordium. Orthologous to human MZB1 (marginal zone B and B1 cell specific protein). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in spleen adult (RPKM 34.5), large intestine adult (RPKM 13.7) and 7 other tissues See more
Orthologs
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Genomic context

Location:
18 B2; 18 19.19 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (35780318..35782420, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (35647265..35650266, complement)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA, H/ACA box 74A Neighboring gene small nucleolar RNA host gene 4 Neighboring gene matrin 3 Neighboring gene STARR-positive B cell enhancer ABC_E9973 Neighboring gene STARR-positive B cell enhancer ABC_E5651 Neighboring gene polyadenylate-binding protein-interacting protein 2 Neighboring gene solute carrier family 23 (nucleobase transporters), member 1 Neighboring gene STARR-seq mESC enhancer starr_44241 Neighboring gene STARR-seq mESC enhancer starr_44242 Neighboring gene STARR-positive B cell enhancer ABC_E7578 Neighboring gene proline rich basic protein 1 Neighboring gene spermatogenesis associated 24

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (3)  1 citation
  • Endonuclease-mediated (2) 

General gene information

Markers

Clone Names

  • MGC73549

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
part_of endoplasmic reticulum chaperone complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of endoplasmic reticulum chaperone complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in endoplasmic reticulum lumen IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in extracellular region IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular region IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular region ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
marginal zone B- and B1-cell-specific protein
Names
plasma cell-induced ER protein 1
plasma cell-induced resident ER protein
plasma cell-induced resident endoplasmic reticulum protein
proapoptotic caspase adapter protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027222.3NP_081498.2  marginal zone B- and B1-cell-specific protein precursor

    See identical proteins and their annotated locations for NP_081498.2

    Status: VALIDATED

    Source sequence(s)
    AA866731, AK008016, BC064044
    Consensus CDS
    CCDS29145.1
    UniProtKB/Swiss-Prot
    D2IYS1, Q6P3D3, Q8BU13, Q8K2M5, Q9D8I1
    Related
    ENSMUSP00000025211.5, ENSMUST00000025211.6
    Conserved Domains (1) summary
    pfam11938
    Location:48171
    DUF3456; TLR4 regulator and MIR-interacting MSAP

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    35780318..35782420 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)