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Emc10 ER membrane protein complex subunit 10 [ Mus musculus (house mouse) ]

Gene ID: 69683, updated on 21-Apr-2024

Summary

Official Symbol
Emc10provided by MGI
Official Full Name
ER membrane protein complex subunit 10provided by MGI
Primary source
MGI:MGI:1916933
See related
Ensembl:ENSMUSG00000008140 AllianceGenome:MGI:1916933
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Inm02; Mirta22; 2310044H10Rik; 5430410O10Rik
Summary
Predicted to contribute to membrane insertase activity. Involved in several processes, including positive regulation of endothelial cell migration; positive regulation of endothelial cell proliferation; and positive regulation of p38MAPK cascade. Located in extracellular region. Is expressed in several structures, including brain; cardiovascular system; genitourinary system; gut; and respiratory system. Orthologous to human EMC10 (ER membrane protein complex subunit 10). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in adrenal adult (RPKM 166.5), ovary adult (RPKM 122.4) and 28 other tissues See more
Orthologs
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Genomic context

Location:
7 B3; 7 28.83 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (44139361..44145953, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (44489937..44496524, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene Josephin domain containing 2 Neighboring gene microRNA 7052 Neighboring gene RIKEN cDNA 5430431A17 gene Neighboring gene STARR-seq mESC enhancer starr_18800 Neighboring gene golgi associated RAB2 interactor 5A Neighboring gene myosin binding protein C, fast-type Neighboring gene STARR-positive B cell enhancer ABC_E10437 Neighboring gene Spi-B transcription factor (Spi-1/PU.1 related)

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
contributes_to membrane insertase activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of EMC complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of EMC complex ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum membrane ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum membrane NAS
Non-traceable Author Statement
more info
PubMed 
located_in extracellular region IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular region ISO
Inferred from Sequence Orthology
more info
 
located_in membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
ER membrane protein complex subunit 10
Names
UPF0510 protein INM02
hematopoietic signal peptide-containing membrane domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001355107.1NP_001342036.1  ER membrane protein complex subunit 10 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC149607
    UniProtKB/TrEMBL
    A0A0X1KG67
    Related
    ENSMUSP00000113141.4, ENSMUST00000118515.9
  2. NM_197991.3NP_932108.3  ER membrane protein complex subunit 10 isoform 1 precursor

    Status: VALIDATED

    Source sequence(s)
    AC149607
    Consensus CDS
    CCDS52231.2
    UniProtKB/Swiss-Prot
    Q3TAS6, Q3TFU1, Q5UCC3, Q5UCC5, Q8VCD8, Q99JJ8
    UniProtKB/TrEMBL
    A0A0X1KG67
    Related
    ENSMUSP00000113509.4, ENSMUST00000118808.9

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    44139361..44145953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030242972.2XP_030098832.1  ER membrane protein complex subunit 10 isoform X1

    UniProtKB/TrEMBL
    A0A0X1KG67
  2. XM_006541176.3XP_006541239.1  ER membrane protein complex subunit 10 isoform X2

    UniProtKB/TrEMBL
    A0A0X1KG67
    Related
    ENSMUSP00000116293.4, ENSMUST00000138328.3

RNA

  1. XR_003946559.2 RNA Sequence