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2310043O21Rik RIKEN cDNA 2310043O21 gene [ Mus musculus (house mouse) ]

Gene ID: 69679, updated on 8-Feb-2024

Summary

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Official Symbol
2310043O21Rikprovided by MGI
Official Full Name
RIKEN cDNA 2310043O21 geneprovided by MGI
Primary source
MGI:MGI:1916929
See related
Ensembl:ENSMUSG00000102106 AllianceGenome:MGI:1916929
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
15; 15 B3.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (38549588..38595178, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (38549344..38594934, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_38459 Neighboring gene predicted gene, 41308 Neighboring gene microRNA 6951 Neighboring gene antizyme inhibitor 1 Neighboring gene STARR-seq mESC enhancer starr_38461 Neighboring gene STARR-positive B cell enhancer mm9_chr15:38447814-38448115 Neighboring gene STARR-positive B cell enhancer mm9_chr15:38448868-38449169 Neighboring gene STARR-positive B cell enhancer ABC_E10850 Neighboring gene predicted gene, 41309 Neighboring gene siah E3 ubiquitin protein ligase 1, pseudogene 2 Neighboring gene predicted gene, 29697 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:38532013-38532196 Neighboring gene RIKEN cDNA 1100001I12 gene Neighboring gene STARR-positive B cell enhancer ABC_E1172 Neighboring gene ATPase, H+ transporting, lysosomal V1 subunit C1 Neighboring gene predicted gene, 53877

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045757.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK009791
    Related
    ENSMUST00000185323.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    38549588..38595178 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.