U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Etd embryonic testis differentiation [ Mus musculus (house mouse) ]

Gene ID: 69501, updated on 8-Feb-2024

Summary

Go to the top of the page Help
Official Symbol
Etdprovided by MGI
Official Full Name
embryonic testis differentiationprovided by MGI
Primary source
MGI:MGI:1916751
See related
Ensembl:ENSMUSG00000060967 AllianceGenome:MGI:1916751
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700030K02Rik
Summary
Is expressed in ovary; primary sex cord; and testis. Orthologous to several human genes including ETDB (embryonic testis differentiation homolog B) and ETDC (embryonic testis differentiation homolog C). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 5.2) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Etd in Genome Data Viewer
Location:
X A5; X 29.64 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (52523795..52532453)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (53434918..53443576)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene motile sperm domain containing 1 Neighboring gene casein kinase 1, gamma 3 pseudogene Neighboring gene STARR-seq mESC enhancer starr_47193 Neighboring gene golgin subfamily A member 6-like protein 22 Neighboring gene RIKEN cDNA 4933416I08 gene

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Female-to-male sex reversal in mice caused by transgenic overexpression of Dmrt1. Zhao L, et al. Development, 2015 Mar 15. PMID 25725066
  2. Sexually dimorphic gene expression in the developing mouse gonad. Menke DB, et al. Gene Expr Patterns, 2002 Dec. PMID 12617826
  3. Sex reversal in C57BL/6J XY mice caused by increased expression of ovarian genes and insufficient activation of the testis determining pathway. Correa SM, et al. PLoS Genet, 2012. PMID 22496664, Free PMC Article
  4. Using real time RT-PCR analysis to determine multiple gene expression patterns during XX and XY mouse fetal gonad development. Bouma GJ, et al. Gene Expr Patterns, 2004 Nov. PMID 15533830
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

Go to the top of the page Help

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Go to the top of the page Help

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

Go to the top of the page Help
Preferred Names
embryonic testis differentiation protein
Names
embryonic testis differentiation-associated

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175147.2 → NP_780356.1  embryonic testis differentiation protein

    Status: VALIDATED

    Source sequence(s)
    AY134667
    UniProtKB/Swiss-Prot
    Q80SW5
    Related
    ENSMUSP00000073854.7, ENSMUST00000074232.7

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    52523795..52532453
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q80SW5.1 GenPept UniProtKB/Swiss-Prot:Q80SW5

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous