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SNORD5 small nucleolar RNA, C/D box 5 [ Homo sapiens (human) ]

Gene ID: 692072, updated on 10-Oct-2023

Summary

Official Symbol
SNORD5provided by HGNC
Official Full Name
small nucleolar RNA, C/D box 5provided by HGNC
Primary source
HGNC:HGNC:32702
See related
Ensembl:ENSG00000239195 AllianceGenome:HGNC:32702
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
mgh28S-2410
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Genomic context

See SNORD5 in Genome Data Viewer
Location:
11q21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (93733228..93733300, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (93649609..93649681, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (93466394..93466466, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor, RNA polymerase I subunit D Neighboring gene small nucleolar RNA, H/ACA box 1 Neighboring gene small nucleolar RNA, H/ACA box 8 Neighboring gene small nucleolar RNA, H/ACA box 18 Neighboring gene microRNA 1304

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • mgh28S-2410 snoRNA

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003033.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AJ609488
    Related
    ENST00000459342.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    93733228..93733300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    93649609..93649681 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)