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Manbal mannosidase, beta A, lysosomal-like [ Mus musculus (house mouse) ]

Gene ID: 69161, updated on 5-Mar-2024

Summary

Official Symbol
Manbalprovided by MGI
Official Full Name
mannosidase, beta A, lysosomal-likeprovided by MGI
Primary source
MGI:MGI:1916411
See related
Ensembl:ENSMUSG00000063019 AllianceGenome:MGI:1916411
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1810024K12Rik
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MANBAL (mannosidase beta like). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in bladder adult (RPKM 38.6), lung adult (RPKM 37.2) and 28 other tissues See more
Orthologs
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Genomic context

See Manbal in Genome Data Viewer
Location:
2 H1; 2 78.29 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (157209514..157238683)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (157367584..157396763)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene growth hormone releasing hormone Neighboring gene STARR-positive B cell enhancer ABC_E3415 Neighboring gene predicted gene, 39974 Neighboring gene STARR-seq mESC enhancer starr_06203 Neighboring gene STARR-seq mESC enhancer starr_06206 Neighboring gene STARR-seq mESC enhancer starr_06210 Neighboring gene Rous sarcoma oncogene Neighboring gene VISTA enhancer mm1673 Neighboring gene predicted gene 14279

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026968.3NP_081244.2  protein MANBAL

    See identical proteins and their annotated locations for NP_081244.2

    Status: VALIDATED

    Source sequence(s)
    BX510908
    Consensus CDS
    CCDS38304.1
    UniProtKB/Swiss-Prot
    Q3TDU6, Q91YV8, Q9D8X0
    UniProtKB/TrEMBL
    A2BGN7
    Related
    ENSMUSP00000079965.6, ENSMUST00000081202.6
    Conserved Domains (1) summary
    pfam06783
    Location:774
    UPF0239; Uncharacterized protein family (UPF0239)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    157209514..157238683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006500128.3XP_006500191.1  protein MANBAL isoform X1

    See identical proteins and their annotated locations for XP_006500191.1

    UniProtKB/Swiss-Prot
    Q3TDU6, Q91YV8, Q9D8X0
    UniProtKB/TrEMBL
    A2BGN7
    Conserved Domains (1) summary
    pfam06783
    Location:774
    UPF0239; Uncharacterized protein family (UPF0239)