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1810013D15Rik RIKEN cDNA 1810013D15 gene [ Mus musculus (house mouse) ]

Gene ID: 69042, updated on 8-Feb-2024

Summary

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Official Symbol
1810013D15Rikprovided by MGI
Official Full Name
RIKEN cDNA 1810013D15 geneprovided by MGI
Primary source
MGI:MGI:1916292
See related
Ensembl:ENSMUSG00000028177 AllianceGenome:MGI:1916292
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See 1810013D15Rik in Genome Data Viewer
Location:
3 H4; 3 81.57 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (157630845..157643992)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (157925208..157938355)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene 6520 Neighboring gene STARR-seq mESC enhancer starr_09381 Neighboring gene cystathionine gamma lyase Neighboring gene STARR-seq mESC enhancer starr_09383 Neighboring gene STARR-seq mESC enhancer starr_09384 Neighboring gene STARR-positive B cell enhancer ABC_E2102 Neighboring gene STARR-seq mESC enhancer starr_09387 Neighboring gene STARR-positive B cell enhancer ABC_E7952 Neighboring gene STARR-positive B cell enhancer ABC_E8807 Neighboring gene ankyrin repeat domain 13c Neighboring gene serine and arginine-rich splicing factor 11 Neighboring gene STARR-seq mESC enhancer starr_09389 Neighboring gene STARR-positive B cell enhancer ABC_E2684

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Clone Names

  • AC117211.2

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC69042

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    157630845..157643992
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_867796.2 RNA Sequence

  2. XR_003954596.1 RNA Sequence

  3. XR_376286.3 RNA Sequence

    Related
    ENSMUST00000196971.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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