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Anapc13 anaphase promoting complex subunit 13 [ Mus musculus (house mouse) ]

Gene ID: 69010, updated on 5-Mar-2024

Summary

Official Symbol
Anapc13provided by MGI
Official Full Name
anaphase promoting complex subunit 13provided by MGI
Primary source
MGI:MGI:1916260
See related
Ensembl:ENSMUSG00000035048 AllianceGenome:MGI:1916260
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
SWM1; APC13; 1810004D07Rik
Summary
Predicted to be involved in protein K11-linked ubiquitination. Predicted to act upstream of or within cell division. Predicted to be located in nucleus. Predicted to be part of anaphase-promoting complex. Is expressed in several structures, including gallbladder; genitourinary system; gut gland; nervous system; and retina. Orthologous to human ANAPC13 (anaphase promoting complex subunit 13). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 56.9), placenta adult (RPKM 44.4) and 28 other tissues See more
Orthologs
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Genomic context

See Anapc13 in Genome Data Viewer
Location:
9 F1; 9 54.64 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (102503495..102511443)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (102626296..102634244)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene karyopherin alpha 7 (importin alpha 8) pseudogene Neighboring gene predicted gene 29387 Neighboring gene WD repeat domain 85 pseudogene Neighboring gene centrosomal protein 63 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:102528825-102529014 Neighboring gene VISTA enhancer mm1302 Neighboring gene STARR-seq mESC enhancer starr_25068 Neighboring gene predicted gene, 46150 Neighboring gene STARR-seq mESC enhancer starr_25069 Neighboring gene angiomotin-like 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cell cycle IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in protein K11-linked ubiquitination IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein K11-linked ubiquitination ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of anaphase-promoting complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of anaphase-promoting complex ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
anaphase-promoting complex subunit 13
Names
cyclosome subunit 13
cylosome subunit 13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_181394.3NP_852059.1  anaphase-promoting complex subunit 13

    See identical proteins and their annotated locations for NP_852059.1

    Status: VALIDATED

    Source sequence(s)
    BC028526, BY347589
    Consensus CDS
    CCDS40744.1
    UniProtKB/Swiss-Prot
    Q8R034
    Related
    ENSMUSP00000140967.2, ENSMUST00000190279.7
    Conserved Domains (1) summary
    pfam05839
    Location:174
    Apc13p; Apc13p protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    102503495..102511443
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006511807.5XP_006511870.1  anaphase-promoting complex subunit 13 isoform X1

    See identical proteins and their annotated locations for XP_006511870.1

    UniProtKB/Swiss-Prot
    Q8R034
    Related
    ENSMUSP00000139762.2, ENSMUST00000186693.2
    Conserved Domains (1) summary
    pfam05839
    Location:174
    Apc13p; Apc13p protein
  2. XM_006511806.4XP_006511869.1  anaphase-promoting complex subunit 13 isoform X1

    See identical proteins and their annotated locations for XP_006511869.1

    UniProtKB/Swiss-Prot
    Q8R034
    Related
    ENSMUSP00000140325.2, ENSMUST00000188398.7
    Conserved Domains (1) summary
    pfam05839
    Location:174
    Apc13p; Apc13p protein
  3. XM_036155234.1XP_036011127.1  anaphase-promoting complex subunit 13 isoform X1

    UniProtKB/Swiss-Prot
    Q8R034
    Conserved Domains (1) summary
    pfam05839
    Location:174
    Apc13p; Apc13p protein