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Mrpl52 mitochondrial ribosomal protein L52 [ Mus musculus (house mouse) ]

Gene ID: 68836, updated on 5-Mar-2024

Summary

Official Symbol
Mrpl52provided by MGI
Official Full Name
mitochondrial ribosomal protein L52provided by MGI
Primary source
MGI:MGI:1916086
See related
Ensembl:ENSMUSG00000010406 AllianceGenome:MGI:1916086
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1110047B07Rik
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Located in mitochondrion. Is expressed in several structures, including early conceptus; gonad; heart; liver; and metanephros. Orthologous to human MRPL52 (mitochondrial ribosomal protein L52). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in adrenal adult (RPKM 592.3), duodenum adult (RPKM 371.9) and 23 other tissues See more
Orthologs
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Genomic context

Location:
14 C2; 14 27.78 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (54664366..54667207)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (54426909..54429750)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4H pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E3114 Neighboring gene oxidase assembly 1-like Neighboring gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 Neighboring gene STARR-seq mESC enhancer starr_36728 Neighboring gene STARR-positive B cell enhancer ABC_E3115 Neighboring gene STARR-seq mESC enhancer starr_36729 Neighboring gene STARR-seq mESC enhancer starr_36730 Neighboring gene STARR-seq mESC enhancer starr_36733 Neighboring gene matrix metallopeptidase 14 (membrane-inserted) Neighboring gene STARR-positive B cell enhancer mm9_chr14:55067911-55068211 Neighboring gene predicted gene, 24424

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from PubChem

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in mitochondrial translation NAS
Non-traceable Author Statement
more info
PubMed 
involved_in translation IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in mitochondrial inner membrane NAS
Non-traceable Author Statement
more info
PubMed 
part_of mitochondrial large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of mitochondrial large ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
part_of mitochondrial large ribosomal subunit NAS
Non-traceable Author Statement
more info
PubMed 
located_in mitochondrion HDA PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
large ribosomal subunit protein mL52
Names
39S ribosomal protein L52, mitochondrial
L52mt
MRP-L52

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026851.2NP_081127.1  large ribosomal subunit protein mL52 precursor

    See identical proteins and their annotated locations for NP_081127.1

    Status: PROVISIONAL

    Source sequence(s)
    AK004194
    Consensus CDS
    CCDS27088.1
    UniProtKB/Swiss-Prot
    Q6PAU6, Q9D0Y8
    Related
    ENSMUSP00000010550.8, ENSMUST00000010550.12

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    54664366..54667207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)