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Micu2 mitochondrial calcium uptake 2 [ Mus musculus (house mouse) ]

Gene ID: 68514, updated on 21-Apr-2024

Summary

Official Symbol
Micu2provided by MGI
Official Full Name
mitochondrial calcium uptake 2provided by MGI
Primary source
MGI:MGI:1915764
See related
Ensembl:ENSMUSG00000021973 AllianceGenome:MGI:1915764
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Efha1; Smhs2; 1110008L20Rik; 4833427E09Rik
Summary
Enables calcium ion binding activity and protein heterodimerization activity. Involved in mitochondrial calcium ion transmembrane transport and positive regulation of mitochondrial calcium ion concentration. Located in mitochondrion. Part of calcium channel complex. Orthologous to human MICU2 (mitochondrial calcium uptake 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in bladder adult (RPKM 13.6), CNS E11.5 (RPKM 13.1) and 28 other tissues See more
Orthologs
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Genomic context

Location:
14 C3; 14 30.51 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (58153718..58236716, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (57916280..57999296, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 22738 Neighboring gene STARR-seq mESC enhancer starr_36817 Neighboring gene zinc finger, DHHC domain containing 20 Neighboring gene STARR-seq mESC enhancer starr_36818 Neighboring gene STARR-positive B cell enhancer ABC_E7320 Neighboring gene STARR-seq mESC enhancer starr_36822 Neighboring gene STARR-positive B cell enhancer ABC_E8996 Neighboring gene STARR-positive B cell enhancer ABC_E8560 Neighboring gene RIKEN cDNA 3110083C13 gene Neighboring gene high mobility group box 3 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables calcium ion binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables calcium ion binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein heterodimerization activity IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein heterodimerization activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of calcium channel complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in mitochondrial inner membrane ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrial intermembrane space ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion HDA PubMed 
located_in mitochondrion IMP
Inferred from Mutant Phenotype
more info
PubMed 
part_of uniplex complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of uniplex complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
calcium uptake protein 2, mitochondrial
Names
EF hand domain family A1
EF-hand domain-containing family member A1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001418535.1NP_001405464.1  calcium uptake protein 2, mitochondrial isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC125399
  2. NM_001418536.1NP_001405465.1  calcium uptake protein 2, mitochondrial isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC125399
  3. NM_028643.4NP_082919.1  calcium uptake protein 2, mitochondrial isoform 1

    See identical proteins and their annotated locations for NP_082919.1

    Status: VALIDATED

    Source sequence(s)
    AC125399
    Consensus CDS
    CCDS27163.1
    UniProtKB/Swiss-Prot
    Q3TJU4, Q8CD10, Q8K0K2, Q9CUR8
    Related
    ENSMUSP00000022543.9, ENSMUST00000022543.10
    Conserved Domains (1) summary
    pfam13833
    Location:345391
    EF-hand_8; EF-hand domain pair

RNA

  1. NR_184778.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC125399

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    58153718..58236716 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)