U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gpihbp1 GPI-anchored HDL-binding protein 1 [ Mus musculus (house mouse) ]

Gene ID: 68453, updated on 21-Apr-2024

Summary

Official Symbol
Gpihbp1provided by MGI
Official Full Name
GPI-anchored HDL-binding protein 1provided by MGI
Primary source
MGI:MGI:1915703
See related
Ensembl:ENSMUSG00000022579 AllianceGenome:MGI:1915703
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
GPI-HBP1; 1110002J19Rik
Summary
Enables lipase binding activity; lipoprotein particle binding activity; and protein transporter activity. Involved in several processes, including lipid homeostasis; positive regulation of chylomicron remnant clearance; and protein transport. Acts upstream of or within lipid transport. Located in apical plasma membrane; basolateral plasma membrane; and external side of plasma membrane. Is anchored component of plasma membrane. Human ortholog(s) of this gene implicated in familial GPIHBP1 deficiency. Orthologous to human GPIHBP1 (glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in lung adult (RPKM 157.2), subcutaneous fat pad adult (RPKM 146.6) and 10 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
15 D3; 15 34.59 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (75468479..75470062)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (75596630..75598213)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34646 Neighboring gene lymphocyte antigen 6 family member H Neighboring gene STARR-positive B cell enhancer ABC_E1174 Neighboring gene zinc finger protein 41 Neighboring gene STARR-seq mESC enhancer starr_39016 Neighboring gene predicted gene, 46519

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables acetylcholine receptor inhibitor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables chylomicron binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables chylomicron binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables chylomicron binding ISO
Inferred from Sequence Orthology
more info
 
enables high-density lipoprotein particle binding IDA
Inferred from Direct Assay
more info
PubMed 
enables lipase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables lipase binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables lipase binding ISO
Inferred from Sequence Orthology
more info
 
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 
enables lipoprotein lipase activator activity ISO
Inferred from Sequence Orthology
more info
 
enables lipoprotein particle binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables lipoprotein particle binding ISO
Inferred from Sequence Orthology
more info
 
enables protein transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in cholesterol homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
NOT acts_upstream_of_or_within cholesterol transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in intracellular protein transport IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within lipid transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of chylomicron remnant clearance IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of chylomicron remodeling IC
Inferred by Curator
more info
PubMed 
involved_in positive regulation of lipoprotein lipase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of lipoprotein lipase activity IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of lipoprotein lipase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of lipoprotein lipase activity ISO
Inferred from Sequence Orthology
more info
 
involved_in protein import IDA
Inferred from Direct Assay
more info
PubMed 
involved_in protein localization to cell surface IDA
Inferred from Direct Assay
more info
PubMed 
involved_in protein stabilization IDA
Inferred from Direct Assay
more info
PubMed 
involved_in protein stabilization ISO
Inferred from Sequence Orthology
more info
 
involved_in response to heparin ISO
Inferred from Sequence Orthology
more info
 
involved_in transcytosis IDA
Inferred from Direct Assay
more info
PubMed 
involved_in triglyceride catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in triglyceride homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in triglyceride homeostasis IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in triglyceride homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in triglyceride homeostasis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in apical plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in basolateral plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
part_of catalytic complex ISO
Inferred from Sequence Orthology
more info
 
located_in cell surface IDA
Inferred from Direct Assay
more info
PubMed 
located_in external side of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in external side of plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in side of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1
Names
high density lipoprotein-binding protein 1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001347039.2NP_001333968.1  glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC119264
    Consensus CDS
    CCDS84173.1
    UniProtKB/TrEMBL
    A0A087WNV7
    Related
    ENSMUSP00000139511.2, ENSMUST00000189944.7
  2. NM_001361294.1NP_001348223.1  glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 isoform 3 precursor

    Status: VALIDATED

    Source sequence(s)
    AC119264, AK050431, BC061225
    Consensus CDS
    CCDS88781.1
    UniProtKB/TrEMBL
    A0A087WPI6
    Related
    ENSMUSP00000139792.2, ENSMUST00000189874.2
    Conserved Domains (1) summary
    cl10471
    Location:61106
    LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
  3. NM_026730.2NP_081006.1  glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 isoform 1 precursor

    See identical proteins and their annotated locations for NP_081006.1

    Status: VALIDATED

    Source sequence(s)
    AC119264, BC061225
    Consensus CDS
    CCDS27545.1
    UniProtKB/Swiss-Prot
    Q9D1N2
    Related
    ENSMUSP00000023243.5, ENSMUST00000023243.11
    Conserved Domains (1) summary
    cd00117
    Location:61138
    LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    75468479..75470062
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)