U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

C630043F03Rik RIKEN cDNA C630043F03 gene [ Mus musculus (house mouse) ]

Gene ID: 68285, updated on 8-Feb-2024

Summary

Go to the top of the page Help
Official Symbol
C630043F03Rikprovided by MGI
Official Full Name
RIKEN cDNA C630043F03 geneprovided by MGI
Primary source
MGI:MGI:1915535
See related
Ensembl:ENSMUSG00000084910 AllianceGenome:MGI:1915535
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
4 C2; 4 36.06 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (72119481..72122167)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (72201244..72203930)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 11231 Neighboring gene STARR-seq mESC enhancer starr_10525 Neighboring gene predicted gene 11232 Neighboring gene STARR-seq mESC enhancer starr_10526 Neighboring gene STARR-seq mESC enhancer starr_10527 Neighboring gene STARR-seq mESC enhancer starr_10528 Neighboring gene STARR-positive B cell enhancer ABC_E2695 Neighboring gene transducin-like enhancer of split 1 Neighboring gene STARR-seq mESC enhancer starr_10529 Neighboring gene STARR-seq mESC enhancer starr_10530 Neighboring gene STARR-seq mESC enhancer starr_10531 Neighboring gene STARR-seq mESC enhancer starr_10532 Neighboring gene STARR-seq mESC enhancer starr_10533 Neighboring gene STARR-seq mESC enhancer starr_10534 Neighboring gene aldolase 1 A, retrogene 1 Neighboring gene pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Deletion of the sclerotome-enriched lncRNA PEAT augments ribosomal protein expression. Stafford DA, et al. Proc Natl Acad Sci U S A, 2017 Jan 3. PMID 27986952, Free PMC Article
  2. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027923.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK041409, AK043880
    Related
    ENSMUST00000246336.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    72119481..72122167
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.