Mansc1 MANSC domain containing 1 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Mansc1provided by MGI
Official Full Name: MANSC domain containing 1provided by MGI
Primary source: MGI:MGI:1914979
See related: Ensembl:ENSMUSG00000032718 AllianceGenome:MGI:1914979
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 9130403P13Rik
Summary: Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; respiratory system; and sensory organ. Orthologous to human MANSC1 (MANSC domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Broad expression in colon adult (RPKM 17.3), stomach adult (RPKM 8.5) and 18 other tissues See more
Orthologs: human all
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Genomic context

Location:: 6 G1; 6 65.75 cM

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	6	NC_000072.7 (134586170..134609451, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	6	NC_000072.6 (134609207..134632488, complement)

Chromosome 6 - NC_000072.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Targeted (1) 1 citation

General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in Golgi apparatus	IBA Inferred from Biological aspect of Ancestor more info
is_active_in cellular_component	ND No biological Data available more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: MANSC domain-containing protein 1

NP_080621.1

EC 3.2.1.14

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_026345.4 → NP_080621.1 MANSC domain-containing protein 1 precursor

See identical proteins and their annotated locations for NP_080621.1

Status: VALIDATED

Source sequence(s)

AK033557, BC039930

Consensus CDS

CCDS20637.1

UniProtKB/Swiss-Prot

Q80V71, Q9CR33

UniProtKB/TrEMBL

Q3TAH6

Related

ENSMUSP00000038346.4, ENSMUST00000047443.5

Conserved Domains (2) summary

smart00765
Location:23 → 116

MANEC; The MANEC domain, formerly called MANSC

PHA03255
Location:234 → 394

PHA03255; BDLF3; Provisional