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Gpalpp1 GPALPP motifs containing 1 [ Mus musculus (house mouse) ]

Gene ID: 67467, updated on 30-Apr-2024

Summary

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Official Symbol
Gpalpp1provided by MGI
Official Full Name
GPALPP motifs containing 1provided by MGI
Primary source
MGI:MGI:1914717
See related
Ensembl:ENSMUSG00000022008 AllianceGenome:MGI:1914717
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Kiaa1704; 1200011I18Rik
Summary
Orthologous to human GPALPP1 (GPALPP motifs containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 4.6), bladder adult (RPKM 4.4) and 28 other tissues See more
Orthologs
human all
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Genomic context

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Location:
14 D3; 14 40.34 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (76323672..76348255, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (76086232..76110815, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene general transcription factor IIF, polypeptide 2 Neighboring gene predicted gene, 36429 Neighboring gene predicted gene, 36477 Neighboring gene STARR-seq mESC enhancer starr_37162 Neighboring gene STARR-seq mESC enhancer starr_37163 Neighboring gene STARR-seq mESC enhancer starr_37165 Neighboring gene nuclear FMR1 interacting protein 1 Neighboring gene STARR-seq mESC enhancer starr_37169 Neighboring gene nuclear encoded tRNA glutamic acid 6 (anticodon TTC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Hdac4 Interactions in Huntington's Disease Viewed Through the Prism of Multiomics. Federspiel JD, et al. Mol Cell Proteomics, 2019 Aug 9. PMID 31040226, Free PMC Article
  2. Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, et al. DNA Res, 2004 Jun 30. PMID 15368895
  3. Database resources of the National Center for Biotechnology Information. Wheeler DL, et al. Nucleic Acids Res, 2001 Jan 1. PMID 11125038, Free PMC Article
  4. BraInMap Elucidates the Macromolecular Connectivity Landscape of Mammalian Brain. Pourhaghighi R, et al. Cell Syst, 2020 Apr 22. PMID 32325033, Free PMC Article
  5. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
GPALPP motifs-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026177.3 → NP_080453.2  GPALPP motifs-containing protein 1

    See identical proteins and their annotated locations for NP_080453.2

    Status: VALIDATED

    Source sequence(s)
    AC125128, AK016681, AK033528, AK082912
    Consensus CDS
    CCDS27283.1
    UniProtKB/Swiss-Prot
    Q69ZC8, Q8K2V8
    Related
    ENSMUSP00000022585.4, ENSMUST00000022585.5
    Conserved Domains (1) summary
    pfam12572
    Location:210 → 338
    DUF3752; Protein of unknown function (DUF3752)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    76323672..76348255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036158828.1 → XP_036014721.1  GPALPP motifs-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    Q9D4A1
    Conserved Domains (1) summary
    pfam12572
    Location:47 → 183
    DUF3752; Protein of unknown function (DUF3752)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q69ZC8.2 GenPept UniProtKB/Swiss-Prot:Q69ZC8

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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