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Iqcf4 IQ motif containing F4 [ Mus musculus (house mouse) ]

Gene ID: 67320, updated on 21-Apr-2024

Summary

Official Symbol
Iqcf4provided by MGI
Official Full Name
IQ motif containing F4provided by MGI
Primary source
MGI:MGI:1914570
See related
Ensembl:ENSMUSG00000041009 AllianceGenome:MGI:1914570
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
mtIQ1; 1700042N06Rik
Summary
Predicted to enable calmodulin binding activity. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 83.9) See more
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Genomic context

Location:
9 F1; 9 57.8 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (106445518..106448166, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (106568319..106570967, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene IQ motif containing F5 Neighboring gene STARR-positive B cell enhancer mm9_chr9:106434062-106434362 Neighboring gene IQ motif containing F2 Neighboring gene IQ motif containing F3 Neighboring gene STARR-seq mESC enhancer starr_25155 Neighboring gene predicted gene, 39420 Neighboring gene IQ motif containing F6

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 
  • Endonuclease-mediated (1) 

General protein information

Preferred Names
IQ motif containing F4
Names
testis-specific IQ motif containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026090.2NP_080366.2  IQ motif containing F4

    See identical proteins and their annotated locations for NP_080366.2

    Status: PROVISIONAL

    Source sequence(s)
    BC061014
    Consensus CDS
    CCDS23482.1
    UniProtKB/TrEMBL
    Q0P5Z0, Q6P8Y2
    Related
    ENSMUSP00000082192.4, ENSMUST00000085111.5

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    106445518..106448166 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)