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Mis12 MIS12 kinetochore complex component [ Mus musculus (house mouse) ]

Gene ID: 67139, updated on 11-Apr-2024

Summary

Official Symbol
Mis12provided by MGI
Official Full Name
MIS12 kinetochore complex componentprovided by MGI
Primary source
MGI:MGI:1914389
See related
Ensembl:ENSMUSG00000040599 AllianceGenome:MGI:1914389
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Misc12; 2510025F08Rik
Summary
Predicted to be involved in attachment of mitotic spindle microtubules to kinetochore; kinetochore assembly; and protein localization to kinetochore. Predicted to act upstream of or within chromosome segregation. Predicted to be located in kinetochore and nucleus. Predicted to be part of nuclear MIS12/MIND complex. Orthologous to human MIS12 (MIS12 kinetochore complex component). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in CNS E11.5 (RPKM 10.8), liver E14 (RPKM 7.9) and 24 other tissues See more
Orthologs
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Genomic context

Location:
11 B4; 11 43.21 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (70910394..70918197)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (71019568..71027371)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene RPA interacting protein Neighboring gene complement component 1, q subcomponent binding protein Neighboring gene DEAH-box helicase 33 Neighboring gene predicted gene, 22297 Neighboring gene STARR-positive B cell enhancer ABC_E2359 Neighboring gene Der1-like domain family, member 2 Neighboring gene STARR-positive B cell enhancer ABC_E256 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:70833281-70833468 Neighboring gene RIKEN cDNA 6330403K07 gene Neighboring gene STARR-seq mESC enhancer starr_29883 Neighboring gene RNA binding motif protein 7 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in attachment of mitotic spindle microtubules to kinetochore ISO
Inferred from Sequence Orthology
more info
 
involved_in attachment of spindle microtubules to kinetochore NAS
Non-traceable Author Statement
more info
PubMed 
acts_upstream_of_or_within cell cycle IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within chromosome segregation ISO
Inferred from Sequence Orthology
more info
 
involved_in chromosome segregation ISO
Inferred from Sequence Orthology
more info
 
involved_in kinetochore assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in kinetochore assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 
involved_in mitotic sister chromatid segregation IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of MIS12/MIND type complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of MIS12/MIND type complex ISO
Inferred from Sequence Orthology
more info
 
part_of MIS12/MIND type complex NAS
Non-traceable Author Statement
more info
PubMed 
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 
located_in chromosome, centromeric region ISO
Inferred from Sequence Orthology
more info
 
located_in kinetochore ISO
Inferred from Sequence Orthology
more info
 
located_in kinetochore NAS
Non-traceable Author Statement
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus NAS
Non-traceable Author Statement
more info
PubMed 
located_in spindle pole NAS
Non-traceable Author Statement
more info
PubMed 

General protein information

Preferred Names
protein MIS12 homolog
Names
MIS12 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025993.3NP_080269.1  protein MIS12 homolog

    See identical proteins and their annotated locations for NP_080269.1

    Status: VALIDATED

    Source sequence(s)
    AL596136
    Consensus CDS
    CCDS24973.1
    UniProtKB/Swiss-Prot
    Q3V261, Q5QNU7, Q5QNU8, Q5QNU9, Q9CY25
    Related
    ENSMUSP00000039500.6, ENSMUST00000048807.12
    Conserved Domains (1) summary
    pfam05859
    Location:8140
    Mis12; Mis12 protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    70910394..70918197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006533968.3XP_006534031.1  protein MIS12 homolog isoform X1

    See identical proteins and their annotated locations for XP_006534031.1

    UniProtKB/Swiss-Prot
    Q3V261, Q5QNU7, Q5QNU8, Q5QNU9, Q9CY25
    Conserved Domains (1) summary
    pfam05859
    Location:8140
    Mis12; Mis12 protein
  2. XM_006533969.3XP_006534032.1  protein MIS12 homolog isoform X1

    See identical proteins and their annotated locations for XP_006534032.1

    UniProtKB/Swiss-Prot
    Q3V261, Q5QNU7, Q5QNU8, Q5QNU9, Q9CY25
    Conserved Domains (1) summary
    pfam05859
    Location:8140
    Mis12; Mis12 protein