Uqcrc2 ubiquinol cytochrome c reductase core protein 2 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Uqcrc2provided by MGI
Official Full Name: ubiquinol cytochrome c reductase core protein 2provided by MGI
Primary source: MGI:MGI:1914253
See related: Ensembl:ENSMUSG00000030884 AllianceGenome:MGI:1914253
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 1500004O06Rik
Summary: Predicted to enable metal ion binding activity. Predicted to be involved in proteolysis. Located in mitochondrion. Part of mitochondrial respiratory chain complex III. Is expressed in several structures, including alimentary system; cardiovascular system; integumental system; midbrain; and telencephalon. Human ortholog(s) of this gene implicated in mitochondrial complex III deficiency nuclear type 5. Orthologous to human UQCRC2 (ubiquinol-cytochrome c reductase core protein 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in heart adult (RPKM 199.1), kidney adult (RPKM 85.6) and 25 other tissues See more
Orthologs: human all
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Genomic context

Location:: 7 F2; 7 64.9 cM

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	7	NC_000073.7 (120234412..120258746)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	7	NC_000073.6 (120635189..120659523)

Chromosome 7 - NC_000073.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Nutlin-3a decreases male fertility via UQCRC2
Title: Nutlin-3a decreases male fertility via UQCRC2.

Submit: New GeneRIF Correction

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Gene trapped (1)
Endonuclease-mediated (2)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

Uqcrc2 (e-PCR), detects polymorphism
- UniSTS:527599

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables metalloendopeptidase activity	IEA Inferred from Electronic Annotation more info
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables protein-containing complex binding	ISO Inferred from Sequence Orthology more info

Process	Evidence Code	Pubs
involved_in cellular respiration	NAS Non-traceable Author Statement more info	PubMed
involved_in mitochondrial electron transport, ubiquinol to cytochrome c	NAS Non-traceable Author Statement more info	PubMed
involved_in proteolysis	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrial inner membrane	HDA more info	PubMed
located_in mitochondrial inner membrane	ISO Inferred from Sequence Orthology more info
part_of mitochondrial respiratory chain complex III	IDA Inferred from Direct Assay more info	PubMed
part_of mitochondrial respiratory chain complex III	ISO Inferred from Sequence Orthology more info
part_of mitochondrial respiratory chain complex IV	ISO Inferred from Sequence Orthology more info
located_in mitochondrion	HDA more info	PubMed
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info
located_in mitochondrion	IDA Inferred from Direct Assay more info	PubMed
located_in mitochondrion	ISO Inferred from Sequence Orthology more info
located_in myelin sheath	HDA more info	PubMed
located_in nucleoplasm	ISO Inferred from Sequence Orthology more info
located_in respirasome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: cytochrome b-c1 complex subunit 2, mitochondrial

Names: complex III subunit 2; core protein II; ubiquinol-cytochrome-c reductase complex core protein 2

NP_080175.1

EC 7.1.1.8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_025899.2 → NP_080175.1 cytochrome b-c1 complex subunit 2, mitochondrial precursor

See identical proteins and their annotated locations for NP_080175.1

Status: VALIDATED

Source sequence(s)

AK005151, AK075856, CJ074691

Consensus CDS

CCDS21795.1

UniProtKB/Swiss-Prot

Q8BK11, Q9CVK7, Q9DB77

Related

ENSMUSP00000033176.6, ENSMUST00000033176.7

Conserved Domains (3) summary

COG0612
Location:31 → 436

PqqL; Predicted Zn-dependent peptidase [General function prediction only]

pfam00675
Location:48 → 194

Peptidase_M16; Insulinase (Peptidase family M16)

pfam05193
Location:199 → 378

Peptidase_M16_C; Peptidase M16 inactive domain