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Rassf7 Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 [ Mus musculus (house mouse) ]

Gene ID: 66985, updated on 5-Mar-2024

Summary

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Official Symbol
Rassf7provided by MGI
Official Full Name
Ras association (RalGDS/AF-6) domain family (N-terminal) member 7provided by MGI
Primary source
MGI:MGI:1914235
See related
Ensembl:ENSMUSG00000038618 AllianceGenome:MGI:1914235
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2400009B11Rik
Summary
Predicted to be involved in regulation of microtubule cytoskeleton organization and signal transduction. Predicted to act upstream of or within apoptotic process. Predicted to be located in centriolar satellite. Is expressed in epidermis; gut; respiratory system; and urinary system. Orthologous to human RASSF7 (Ras association domain family member 7). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in colon adult (RPKM 67.0), duodenum adult (RPKM 54.6) and 24 other tissues See more
Orthologs
human all
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Genomic context

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Location:
7 F5; 7 86.51 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (140795338..140798571)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (141215425..141218658)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E9115 Neighboring gene STARR-positive B cell enhancer ABC_E11375 Neighboring gene Harvey rat sarcoma virus oncogene Neighboring gene leucine rich repeat containing 56 Neighboring gene STARR-positive B cell enhancer ABC_E1749 Neighboring gene lamin tail domain containing 2 Neighboring gene STARR-positive B cell enhancer ABC_E2854 Neighboring gene microRNA 210 Neighboring gene STARR-positive B cell enhancer ABC_E11376 Neighboring gene predicted gene, 51460 Neighboring gene PHD and ring finger domains 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. Yokoyama S, et al. Dev Cell, 2009 Dec. PMID 20059953, Free PMC Article
  2. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
  3. Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas. Watahiki A, et al. Nat Methods, 2004 Dec. PMID 15782199
  4. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  5. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within apoptotic process IEA
Inferred from Electronic Annotation
more info
  
involved_in biological_process ND
No biological Data available
more info
  
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in centriolar satellite ISO
Inferred from Sequence Orthology
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ras association domain-containing protein 7
Names
Ras association (RalGDS/AF-6) domain family 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025886.3 → NP_080162.3  ras association domain-containing protein 7

    See identical proteins and their annotated locations for NP_080162.3

    Status: VALIDATED

    Source sequence(s)
    AK010305, AW990538, CK617449
    Consensus CDS
    CCDS40182.1
    UniProtKB/Swiss-Prot
    Q9DD19
    UniProtKB/TrEMBL
    A0A1B0GRE0
    Related
    ENSMUSP00000038444.6, ENSMUST00000046890.12
    Conserved Domains (2) summary
    TIGR02168
    Location:158 → 334
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd16135
    Location:8 → 90
    RA_RASSF7; Ras-associating (RA) domain found in N-terminal Ras-association domain family 7 (RASSF7)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    140795338..140798571
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006536228.4 → XP_006536291.1  ras association domain-containing protein 7 isoform X1

    See identical proteins and their annotated locations for XP_006536291.1

    UniProtKB/Swiss-Prot
    Q9DD19
    UniProtKB/TrEMBL
    A0A1B0GRE0
    Conserved Domains (2) summary
    TIGR02168
    Location:158 → 334
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd16135
    Location:8 → 90
    RA_RASSF7; Ras-associating (RA) domain found in N-terminal Ras-association domain family 7 (RASSF7)

  2. XM_006536226.5 → XP_006536289.1  ras association domain-containing protein 7 isoform X1

    See identical proteins and their annotated locations for XP_006536289.1

    UniProtKB/Swiss-Prot
    Q9DD19
    UniProtKB/TrEMBL
    A0A1B0GRE0
    Conserved Domains (2) summary
    TIGR02168
    Location:158 → 334
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd16135
    Location:8 → 90
    RA_RASSF7; Ras-associating (RA) domain found in N-terminal Ras-association domain family 7 (RASSF7)

  3. XM_006536227.5 → XP_006536290.1  ras association domain-containing protein 7 isoform X1

    See identical proteins and their annotated locations for XP_006536290.1

    UniProtKB/Swiss-Prot
    Q9DD19
    UniProtKB/TrEMBL
    A0A1B0GRE0
    Conserved Domains (2) summary
    TIGR02168
    Location:158 → 334
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd16135
    Location:8 → 90
    RA_RASSF7; Ras-associating (RA) domain found in N-terminal Ras-association domain family 7 (RASSF7)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9DD19.2 GenPept UniProtKB/Swiss-Prot:Q9DD19

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