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Plin3 perilipin 3 [ Mus musculus (house mouse) ]

Gene ID: 66905, updated on 5-Mar-2024

Summary

Official Symbol
Plin3provided by MGI
Official Full Name
perilipin 3provided by MGI
Primary source
MGI:MGI:1914155
See related
Ensembl:ENSMUSG00000024197 AllianceGenome:MGI:1914155
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tip47; M6prbp1; 1300012C15Rik
Summary
Predicted to be involved in lipid storage and positive regulation of sequestering of triglyceride. Predicted to be located in endosome and membrane. Predicted to be active in cytosol and lipid droplet. Is expressed in several structures, including choroid plexus; genitourinary system; gut; nasal septum; and turbinate bone primordium. Orthologous to human PLIN3 (perilipin 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in small intestine adult (RPKM 176.8), duodenum adult (RPKM 150.8) and 22 other tissues See more
Orthologs
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Genomic context

Location:
17 29.25 cM; 17 D
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (56585962..56597511, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (56278962..56290511, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E613 Neighboring gene fem 1 homolog a Neighboring gene STARR-positive B cell enhancer ABC_E7548 Neighboring gene TIR domain containing adaptor molecule 1 Neighboring gene STARR-positive B cell enhancer ABC_E1945 Neighboring gene STARR-positive B cell enhancer ABC_E11798 Neighboring gene STARR-positive B cell enhancer ABC_E8686 Neighboring gene STARR-positive B cell enhancer ABC_E3207 Neighboring gene arrestin domain containing 5 Neighboring gene STARR-positive B cell enhancer ABC_E3208 Neighboring gene STARR-positive B cell enhancer ABC_E3209 Neighboring gene ubiquitin-like, containing PHD and RING finger domains, 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2)  1 citation
  • Endonuclease-mediated (1) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in cellular response to glucose starvation ISO
Inferred from Sequence Orthology
more info
 
involved_in lipid droplet disassembly ISO
Inferred from Sequence Orthology
more info
 
involved_in lipid storage IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in lipid storage ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of sequestering of triglyceride IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 
is_active_in lipid droplet IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in lipid droplet ISO
Inferred from Sequence Orthology
more info
 
located_in lipid droplet TAS
Traceable Author Statement
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
perilipin-3
Names
cargo selection protein TIP47
mannose-6-phosphate receptor binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025836.3NP_080112.1  perilipin-3

    See identical proteins and their annotated locations for NP_080112.1

    Status: VALIDATED

    Source sequence(s)
    AK004970, AK167214
    Consensus CDS
    CCDS28901.1
    UniProtKB/Swiss-Prot
    Q3TK05, Q8BKV9, Q9CZK1, Q9DBG5
    Related
    ENSMUSP00000019726.7, ENSMUST00000019726.8
    Conserved Domains (1) summary
    pfam03036
    Location:19415
    Perilipin; Perilipin family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    56585962..56597511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)