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Tpt1-ps1 tumor protein, translationally-controlled, pseudogene 1 [ Mus musculus (house mouse) ]

Gene ID: 668583, updated on 8-Feb-2024

Summary

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Official Symbol
Tpt1-ps1provided by MGI
Official Full Name
tumor protein, translationally-controlled, pseudogene 1provided by MGI
Primary source
MGI:MGI:107797
See related
AllianceGenome:MGI:107797
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm12487; Tpt1-rs
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Genomic context

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See Tpt1-ps1 in Genome Data Viewer
Location:
3 F2.2; 3 44.06 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (101140804..101141439)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (101233488..101234123)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene prostaglandin F2 receptor negative regulator Neighboring gene STARR-seq mESC enhancer starr_08514 Neighboring gene STARR-seq mESC enhancer starr_08516 Neighboring gene STARR-seq mESC enhancer starr_08517 Neighboring gene STARR-seq mESC enhancer starr_08518 Neighboring gene nuclear import 7 pseudogene Neighboring gene STARR-seq mESC enhancer starr_08522 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:101078754-101078985 Neighboring gene high mobility group box 1-like pseudogene Neighboring gene STARR-seq mESC enhancer starr_08524 Neighboring gene STARR-positive B cell enhancer ABC_E4566 Neighboring gene CD2 antigen

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic organization and expression of mouse Tpt1 gene. Fiucci G, et al. Genomics, 2003 Jun. PMID 12782126
  2. Identification of MAGI-3 as a transforming growth factor-alpha tail binding protein. Franklin JL, et al. Exp Cell Res, 2005 Feb 15. PMID 15652357
  3. Genetic mapping of 262 loci derived from expressed sequences in a murine interspecific cross using single-strand conformational polymorphism analysis. Brady KP, et al. Genome Res, 1997 Nov. PMID 9371744, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • tumor protein, translationally-controlled, related sequence

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_030551.1 

    Range
    101..736
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    101140804..101141439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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