U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Erich2 glutamate rich 2 [ Mus musculus (house mouse) ]

Gene ID: 66748, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
Erich2provided by MGI
Official Full Name
glutamate rich 2provided by MGI
Primary source
MGI:MGI:1913998
See related
Ensembl:ENSMUSG00000075302 AllianceGenome:MGI:1913998
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4933404M02Rik
Summary
Is expressed in embryo and notochord. Orthologous to human ERICH2 (glutamate rich 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 49.4) See more
Orthologs
human all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Erich2 in Genome Data Viewer
Location:
2 C2; 2 41.55 cM
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (70339015..70371229)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (70508671..70540885)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_04760 Neighboring gene ribosomal protein L9, pseudogene 7 Neighboring gene STARR-seq mESC enhancer starr_04762 Neighboring gene trans-acting transcription factor 5 Neighboring gene glutamate decarboxylase 1, opposite strand Neighboring gene STARR-seq mESC enhancer starr_04764 Neighboring gene glutamate decarboxylase 1 Neighboring gene predicted pseudogene 16510

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. CRISPR/Cas9-mediated genome-edited mice reveal 10 testis-enriched genes are dispensable for male fecundity. Park S, et al. Biol Reprod, 2020 Aug 4. PMID 32561905, Free PMC Article
  2. Integrated microarray and ChIP analysis identifies multiple Foxa2 dependent target genes in the notochord. Tamplin OJ, et al. Dev Biol, 2011 Dec 15. PMID 22008794
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

Go to the top of the page Help

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

Go to the top of the page Help
Preferred Names
glutamate-rich protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025744.2 → NP_080020.2  glutamate-rich protein 2

    Status: VALIDATED

    Source sequence(s)
    AK006384, AK016654, AK017113
    Consensus CDS
    CCDS38141.1
    UniProtKB/TrEMBL
    E9Q1A6
    Related
    ENSMUSP00000097619.3, ENSMUST00000100041.9
    Conserved Domains (1) summary
    PRK14954
    Location:25 → 86
    PRK14954; DNA polymerase III subunits gamma and tau; Provisional

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    70339015..70371229
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006500029.4 → XP_006500092.1  glutamate-rich protein 2 isoform X4

    Conserved Domains (1) summary
    PRK14951
    Location:38 → 129
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional

  2. XM_006500030.3 → XP_006500093.1  glutamate-rich protein 2 isoform X5

    UniProtKB/TrEMBL
    D3Z5X9
    Related
    ENSMUSP00000122481.2, ENSMUST00000134607.8
    Conserved Domains (1) summary
    PRK14951
    Location:38 → 129
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional

  3. XM_006500028.5 → XP_006500091.1  glutamate-rich protein 2 isoform X2

    Conserved Domains (1) summary
    PRK14951
    Location:38 → 129
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional

  4. XM_030251959.2 → XP_030107819.1  glutamate-rich protein 2 isoform X3

    Conserved Domains (1) summary
    PRK14951
    Location:38 → 129
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional

  5. XM_006500027.4 → XP_006500090.1  glutamate-rich protein 2 isoform X1

    Conserved Domains (1) summary
    PRK14951
    Location:38 → 129
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional

  6. XM_036162483.1 → XP_036018376.1  glutamate-rich protein 2 isoform X6

  7. XM_030251961.1 → XP_030107821.1  glutamate-rich protein 2 isoform X6

  8. XM_030251960.1 → XP_030107820.1  glutamate-rich protein 2 isoform X6

  9. XM_011239739.2 → XP_011238041.1  glutamate-rich protein 2 isoform X6

    See identical proteins and their annotated locations for XP_011238041.1

  10. XM_011239740.4 → XP_011238042.1  glutamate-rich protein 2 isoform X7

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Tools
Miscellaneous