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Actr2 actin related protein 2 [ Mus musculus (house mouse) ]

Gene ID: 66713, updated on 21-Apr-2024

Summary

Official Symbol
Actr2provided by MGI
Official Full Name
actin related protein 2provided by MGI
Primary source
MGI:MGI:1913963
See related
Ensembl:ENSMUSG00000020152 AllianceGenome:MGI:1913963
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Arp2; D6Ertd746e; 4921510D23Rik
Summary
Predicted to enable cytoskeletal protein binding activity. Predicted to be a structural constituent of cytoskeleton. Predicted to contribute to actin filament binding activity. Acts upstream of or within several processes, including cellular response to interferon-gamma; meiotic chromosome movement towards spindle pole; and meiotic cytokinesis. Located in actin cap. Is expressed in metanephros. Orthologous to human ACTR2 (actin related protein 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in placenta adult (RPKM 51.3), CNS E18 (RPKM 43.4) and 25 other tissues See more
Orthologs
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Genomic context

Location:
11 A3.1; 11 12.88 cM
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (20012304..20062951, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (20062304..20112951, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E10665 Neighboring gene sprouty-related EVH1 domain containing 2 Neighboring gene STARR-seq mESC enhancer starr_28762 Neighboring gene STARR-seq mESC enhancer starr_28763 Neighboring gene STARR-seq mESC enhancer starr_28769 Neighboring gene predicted gene, 39603 Neighboring gene predicted gene, 32080 Neighboring gene STARR-positive B cell enhancer ABC_E1412 Neighboring gene STARR-positive B cell enhancer ABC_E9359 Neighboring gene STARR-positive B cell enhancer mm9_chr11:20032933-20033234 Neighboring gene STARR-seq mESC enhancer starr_28781 Neighboring gene predicted gene, 53671 Neighboring gene predicted gene 12030

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Chemically induced (ENU) (1)  1 citation
  • Endonuclease-mediated (2) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC36604

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables actin binding IEA
Inferred from Electronic Annotation
more info
 
contributes_to actin filament binding IBA
Inferred from Biological aspect of Ancestor
more info
 
contributes_to actin filament binding ISO
Inferred from Sequence Orthology
more info
 
enables cytoskeletal protein binding ISO
Inferred from Sequence Orthology
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables structural constituent of cytoskeleton ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in Arp2/3 complex-mediated actin nucleation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in Arp2/3 complex-mediated actin nucleation ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within actin cytoskeleton organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within asymmetric cell division IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within cellular response to type II interferon IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within cilium assembly ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within cytosolic transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within establishment or maintenance of cell polarity IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within meiotic cell cycle IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within meiotic chromosome movement towards spindle pole IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within meiotic cytokinesis IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of dendritic spine morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of double-strand break repair via homologous recombination ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of lamellipodium assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within spindle localization IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
part_of Arp2/3 protein complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of Arp2/3 protein complex ISO
Inferred from Sequence Orthology
more info
 
located_in actin cap IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cell cortex IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cell cortex IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell projection IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in lamellipodium ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in podosome core ISO
Inferred from Sequence Orthology
more info
 
is_active_in postsynapse ISO
Inferred from Sequence Orthology
more info
 
located_in site of double-strand break ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
actin-related protein 2
Names
ARP2 actin-related protein 2 homolog
actin-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001362899.1NP_001349828.1  actin-related protein 2 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL606522, BP753259
    Conserved Domains (1) summary
    smart00268
    Location:6393
    ACTIN; Actin
  2. NM_146243.2NP_666355.1  actin-related protein 2 isoform 2

    See identical proteins and their annotated locations for NP_666355.1

    Status: VALIDATED

    Source sequence(s)
    AK032832, BE448820, BP753259, BY278998
    Consensus CDS
    CCDS24455.1
    UniProtKB/Swiss-Prot
    P61161, Q6PI31
    UniProtKB/TrEMBL
    Q5SW83
    Related
    ENSMUSP00000000137.8, ENSMUST00000000137.8
    Conserved Domains (1) summary
    smart00268
    Location:6388
    ACTIN; Actin

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    20012304..20062951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)