U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gm8369 predicted gene 8369 [ Mus musculus (house mouse) ]

Gene ID: 666926, updated on 8-Feb-2024

Summary

Go to the top of the page Help
Official Symbol
Gm8369provided by MGI
Official Full Name
predicted gene 8369provided by MGI
Primary source
MGI:MGI:3645380
See related
Ensembl:ENSMUSG00000058470 AllianceGenome:MGI:3645380
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG666926
Expression
Biased expression in spleen adult (RPKM 1.5), mammary gland adult (RPKM 0.7) and 4 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Gm8369 in Genome Data Viewer
Location:
19 A; 19 8.44 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (11469150..11489941)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (11488955..11512577)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene membrane-spanning 4-domains, subfamily A, member 4B Neighboring gene membrane-spanning 4-domains, subfamily A, member 6C Neighboring gene expressed sequence BE692007 Neighboring gene STARR-positive B cell enhancer ABC_E7634 Neighboring gene STARR-positive B cell enhancer ABC_E4266 Neighboring gene STARR-positive B cell enhancer ABC_E11672 Neighboring gene STARR-positive B cell enhancer ABC_E8739 Neighboring gene membrane-spanning 4-domains, subfamily A, member 6B Neighboring gene membrane-spanning 4-domains, subfamily A, member 4D

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
membrane-spanning 4-domains, subfamily A, member 4-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164202.1 → NP_001157674.1  membrane-spanning 4-domains, subfamily A, member 4-like

    See identical proteins and their annotated locations for NP_001157674.1

    Status: PROVISIONAL

    Source sequence(s)
    AC165168, BB637086, BE861164
    Consensus CDS
    CCDS50396.1
    UniProtKB/TrEMBL
    E9PZI3
    Related
    ENSMUSP00000132521.2, ENSMUST00000079855.11
    Conserved Domains (1) summary
    pfam04103
    Location:18 → 68
    CD20; CD20-like family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    11469150..11489941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006527259.4 → XP_006527322.1  membrane-spanning 4-domains, subfamily A, member 4-like isoform X1

    See identical proteins and their annotated locations for XP_006527322.1

    UniProtKB/TrEMBL
    E9PZI3
    Conserved Domains (1) summary
    pfam04103
    Location:18 → 68
    CD20; CD20-like family

  2. XM_036161654.1 → XP_036017547.1  membrane-spanning 4-domains, subfamily A, member 4-like isoform X1

    UniProtKB/TrEMBL
    E9PZI3
    Conserved Domains (1) summary
    pfam04103
    Location:18 → 68
    CD20; CD20-like family

  3. XM_006527263.2 → XP_006527326.1  membrane-spanning 4-domains, subfamily A, member 4-like isoform X1

    See identical proteins and their annotated locations for XP_006527326.1

    UniProtKB/TrEMBL
    E9PZI3
    Conserved Domains (1) summary
    pfam04103
    Location:18 → 68
    CD20; CD20-like family

  4. XM_006527260.2 → XP_006527323.1  membrane-spanning 4-domains, subfamily A, member 4-like isoform X1

    See identical proteins and their annotated locations for XP_006527323.1

    UniProtKB/TrEMBL
    E9PZI3
    Related
    ENSMUSP00000141067.2, ENSMUST00000188633.2
    Conserved Domains (1) summary
    pfam04103
    Location:18 → 68
    CD20; CD20-like family

  5. XM_006527261.3 → XP_006527324.1  membrane-spanning 4-domains, subfamily A, member 4-like isoform X1

    See identical proteins and their annotated locations for XP_006527324.1

    UniProtKB/TrEMBL
    E9PZI3
    Conserved Domains (1) summary
    pfam04103
    Location:18 → 68
    CD20; CD20-like family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools
Miscellaneous