U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC666331 uncharacterized LOC666331 [ Mus musculus (house mouse) ]

Gene ID: 666331, updated on 8-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
LOC666331
Gene description
uncharacterized LOC666331
See related
Ensembl:ENSMUSG00000086617
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 11.8) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
11; 11 D
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (101501526..101507464)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (101610700..101616638)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene coiled coil domain containing 200 Neighboring gene STARR-seq mESC enhancer starr_30771 Neighboring gene predicted gene, 26316 Neighboring gene STARR-seq mESC enhancer starr_30772 Neighboring gene STARR-seq mESC enhancer starr_30774 Neighboring gene STARR-seq mESC enhancer starr_30775 Neighboring gene STARR-positive B cell enhancer ABC_E4003 Neighboring gene predicted gene, 23849 Neighboring gene RAD52 motif 1 Neighboring gene predicted gene, 24950

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC666331

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001256318.1 → NP_001243247.1  uncharacterized protein LOC666331

    See identical proteins and their annotated locations for NP_001243247.1

    Status: VALIDATED

    Source sequence(s)
    AL590994
    Related
    ENSMUST00000139424.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    101501526..101507464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006533962.2 → XP_006534025.1  uncharacterized protein LOC666331 isoform X1

    See identical proteins and their annotated locations for XP_006534025.1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.