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2610528J11Rik RIKEN cDNA 2610528J11 gene [ Mus musculus (house mouse) ]

Gene ID: 66451, updated on 5-Mar-2024

Summary

Official Symbol
2610528J11Rikprovided by MGI
Official Full Name
RIKEN cDNA 2610528J11 geneprovided by MGI
Primary source
MGI:MGI:1913701
See related
Ensembl:ENSMUSG00000028536 AllianceGenome:MGI:1913701
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
TEMP
Summary
Predicted to be located in endosome and plasma membrane. Predicted to be integral component of membrane. Is expressed in brain. Orthologous to human C1orf210 (chromosome 1 open reading frame 210). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in kidney adult (RPKM 46.1), duodenum adult (RPKM 42.4) and 13 other tissues See more
Orthologs
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Genomic context

Location:
4 D2.1; 4 54.78 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (118384207..118387422)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (118526962..118530217)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12859 Neighboring gene ribosomal protein S5 pseudogene Neighboring gene transmembrane protein 125 Neighboring gene predicted gene, 40237

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
type III endosome membrane protein TEMP

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001419078.1NP_001406007.1  type III endosome membrane protein TEMP

    Status: VALIDATED

    Source sequence(s)
    BX842610
    UniProtKB/Swiss-Prot
    Q9CQM1
    Related
    ENSMUSP00000101975.2, ENSMUST00000106367.8
  2. NM_025572.3NP_079848.1  type III endosome membrane protein TEMP

    See identical proteins and their annotated locations for NP_079848.1

    Status: VALIDATED

    Source sequence(s)
    BX842610
    Consensus CDS
    CCDS18554.1
    UniProtKB/Swiss-Prot
    Q9CQM1
    Related
    ENSMUSP00000030261.6, ENSMUST00000030261.6
    Conserved Domains (1) summary
    pfam15176
    Location:1595
    LRR19-TM; Leucine-rich repeat family 19 TM domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    118384207..118387422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)