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Nat9 N-acetyltransferase 9 (GCN5-related, putative) [ Mus musculus (house mouse) ]

Gene ID: 66176, updated on 5-Mar-2024

Summary

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Official Symbol
Nat9provided by MGI
Official Full Name
N-acetyltransferase 9 (GCN5-related, putative)provided by MGI
Primary source
MGI:MGI:1913426
See related
Ensembl:ENSMUSG00000015542 AllianceGenome:MGI:1913426
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1110028N05Rik
Summary
Predicted to enable N-acetyltransferase activity. Predicted to be involved in protein acetylation. Predicted to be part of protein-containing complex. Is expressed in embryo. Orthologous to human NAT9 (N-acetyltransferase 9 (putative)). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in testis adult (RPKM 30.3), ovary adult (RPKM 10.1) and 28 other tissues See more
Orthologs
human all
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Genomic context

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Location:
11 E2; 11 80.68 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (115073655..115078682, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (115182829..115187856, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene RAB37, member RAS oncogene family Neighboring gene CD300 molecule like family member F Neighboring gene STARR-positive B cell enhancer ABC_E11499 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:115019296-115019604 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:115024157-115024344 Neighboring gene STARR-positive B cell enhancer ABC_E91 Neighboring gene NHERF family PDZ scaffold protein 1 Neighboring gene STARR-positive B cell enhancer mm9_chr11:115048516-115048817 Neighboring gene transmembrane protein 104 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:115088135-115088322 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:115088428-115088537 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:115092913-115093101 Neighboring gene glutamate receptor, ionotropic, NMDA2C (epsilon 3) Neighboring gene STARR-positive B cell enhancer ABC_E44 Neighboring gene ferredoxin reductase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas. Watahiki A, et al. Nat Methods, 2004 Dec. PMID 15782199
  2. BraInMap Elucidates the Macromolecular Connectivity Landscape of Mammalian Brain. Pourhaghighi R, et al. Cell Syst, 2020 Apr 22. PMID 32325033, Free PMC Article
  3. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
  4. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables N-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
alpha/beta-tubulin-N-acetyltransferase 9
Names
novel acetyltransferase protein
NP_001349818.1
NP_001349819.1
NP_001349820.1
NP_001349821.1
NP_079676.1
XP_036012784.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001362889.1 → NP_001349818.1  alpha/beta-tubulin-N-acetyltransferase 9 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL606487
    Consensus CDS
    CCDS25622.1
    UniProtKB/Swiss-Prot
    Q3UG98, Q8C1G5, Q9D151
    Related
    ENSMUSP00000099330.2, ENSMUST00000103041.8
    Conserved Domains (1) summary
    pfam13302
    Location:14 → 161
    Acetyltransf_3; Acetyltransferase (GNAT) domain

  2. NM_001362890.1 → NP_001349819.1  alpha/beta-tubulin-N-acetyltransferase 9 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL606487
    Consensus CDS
    CCDS25622.1
    UniProtKB/Swiss-Prot
    Q3UG98, Q8C1G5, Q9D151
    Related
    ENSMUSP00000099327.2, ENSMUST00000103038.8
    Conserved Domains (1) summary
    pfam13302
    Location:14 → 161
    Acetyltransf_3; Acetyltransferase (GNAT) domain

  3. NM_001362891.1 → NP_001349820.1  alpha/beta-tubulin-N-acetyltransferase 9 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL606487
    Conserved Domains (1) summary
    pfam13302
    Location:52 → 131
    Acetyltransf_3; Acetyltransferase (GNAT) domain

  4. NM_001362892.1 → NP_001349821.1  alpha/beta-tubulin-N-acetyltransferase 9 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AL606487, CX208013
    Conserved Domains (1) summary
    pfam13302
    Location:24 → 102
    Acetyltransf_3; Acetyltransferase (GNAT) domain

  5. NM_025400.4 → NP_079676.1  alpha/beta-tubulin-N-acetyltransferase 9 isoform 1

    See identical proteins and their annotated locations for NP_079676.1

    Status: VALIDATED

    Source sequence(s)
    AL606487
    Consensus CDS
    CCDS25622.1
    UniProtKB/Swiss-Prot
    Q3UG98, Q8C1G5, Q9D151
    Related
    ENSMUSP00000099329.5, ENSMUST00000103040.11
    Conserved Domains (1) summary
    pfam13302
    Location:14 → 161
    Acetyltransf_3; Acetyltransferase (GNAT) domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    115073655..115078682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036156891.1 → XP_036012784.1  alpha/beta-tubulin-N-acetyltransferase 9 isoform X1

    Conserved Domains (1) summary
    pfam13302
    Location:24 → 102
    Acetyltransf_3; Acetyltransferase (GNAT) domain
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3UG98.2 GenPept UniProtKB/Swiss-Prot:Q3UG98

Gene LinkOut

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