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KHDC1P1 KH domain containing 1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 653194, updated on 10-Oct-2023

Summary

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Official Symbol
KHDC1P1provided by HGNC
Official Full Name
KH domain containing 1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:43757
See related
AllianceGenome:HGNC:43757
Gene type
pseudo
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See KHDC1P1 in Genome Data Viewer
Location:
6q13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (73208923..73210067, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (74385548..74386692, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily Q member 5 Neighboring gene KCNQ5 antisense RNA 1 Neighboring gene RBPMS2 pseudogene 1 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:73913855-73914676 Neighboring gene KHDC1-KHDC1L Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:73933575-73934774 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17332 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:73978297-73978873 Neighboring gene KH domain containing 1 like Neighboring gene KHDC1 antisense RNA 1 Neighboring gene KH domain containing 1 Neighboring gene chromosome 6 open reading frame 147 Neighboring gene ribosomal protein SA pseudogene 41

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Atypical structure and phylogenomic evolution of the new eutherian oocyte- and embryo-expressed KHDC1/DPPA5/ECAT1/OOEP gene family. Pierre A, et al. Genomics, 2007 Nov. PMID 17913455

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • KH homology domain containing 1 pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    73208923..73210067 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    74385548..74386692 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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