U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GUSBP3 GUSB pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 653188, updated on 8-Nov-2023

Summary

Official Symbol
GUSBP3provided by HGNC
Official Full Name
GUSB pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:37301
See related
Ensembl:ENSG00000290560 AllianceGenome:HGNC:37301
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SMA3; GUSBP1
Summary
Predicted to enable beta-glucuronidase activity; carbohydrate binding activity; and signaling receptor binding activity. Predicted to be involved in glucuronoside catabolic process. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in testis (RPKM 23.2), thyroid (RPKM 10.1) and 24 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
5q13.2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (69639463..69710527, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (70465249..70536305, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (68935290..69006354, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:68928896-68929561 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:68929562-68930228 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:68930229-68930894 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:68937559-68938060 Neighboring gene NAIP pseudogene 3 Neighboring gene POM121 membrane glycoprotein (rat) pseudogene Neighboring gene uncharacterized LOC124900997 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:68958303-68958856 Neighboring gene POM121 membrane glycoprotein (rat) pseudogene Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr5:69005506-69006322 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr5:69006323-69007139 Neighboring gene NANOG hESC enhancer GRCh37_chr5:69068631-69069132 Neighboring gene uncharacterized LOC105379623 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr5:69139757-69140580 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:69185827-69186428 Neighboring gene uncharacterized LOC124900996 Neighboring gene POM121 membrane glycoprotein (rat) pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • Putative inactive beta-glucuronidase-like protein SMA3
  • glucuronidase, beta pseudogene 3

Clone Names

  • FLJ42136, MGC22265

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027386.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC139495
    Related
    ENST00000513408.6

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    69639463..69710527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791777.1 Reference GRCh38.p14 PATCHES

    Range
    1004006..1076172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NW_003315917.2 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    639240..645842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_187651.1 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    49394..121540
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    70465249..70536305 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)