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MUC20P1 mucin 20, cell surface associated pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 651714, updated on 10-Oct-2023

Summary

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Official Symbol
MUC20P1provided by HGNC
Official Full Name
mucin 20, cell surface associated pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:51921
See related
AllianceGenome:HGNC:51921
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3q29
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (195618625..195620237)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (198325713..198327040)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (195345496..195347108)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ribosomal protein L31 pseudogene 64 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_67527 Neighboring gene apolipoprotein D Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_67528 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_67532 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:195345772-195345926 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195350846-195351842 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:195354448-195355072 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:195355073-195355695 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:195359633-195360132 Neighboring gene uncharacterized LOC105374297 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:195373516-195374016 Neighboring gene serine/threonine-protein phosphatase 4 regulatory subunit 2-like Neighboring gene SDHA pseudogene 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:195408429-195408928 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195410251-195410972 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195410973-195411692 Neighboring gene MIR570 host gene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022290.2 

    Range
    101..1713
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    195618625..195620237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    198325713..198327040
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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