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GAPDHP36 glyceraldehyde 3 phosphate dehydrogenase pseudogene 36 [ Homo sapiens (human) ]

Gene ID: 647249, updated on 10-Oct-2023

Summary

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Official Symbol
GAPDHP36provided by HGNC
Official Full Name
glyceraldehyde 3 phosphate dehydrogenase pseudogene 36provided by HGNC
Primary source
HGNC:HGNC:37790
See related
Ensembl:ENSG00000213158 AllianceGenome:HGNC:37790
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3q26.33
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (180212190..180213213)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (183015343..183016366)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (179929978..179931001)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124909465 Neighboring gene NANOG hESC enhancer GRCh37_chr3:179852449-179852950 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:179883200-179883700 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:179883701-179884201 Neighboring gene RNA, 5S ribosomal pseudogene 149 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20874 Neighboring gene RALBP1 pseudogene 1 Neighboring gene long intergenic non-protein coding RNA 2053

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • glyceraldehyde-3-phosphate dehydrogenase pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_016486.1 

    Range
    101..1124
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    180212190..180213213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    183015343..183016366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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