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GSTA11P glutathione S-transferase alpha 11, pseudogene [ Homo sapiens (human) ]

Gene ID: 647175, updated on 10-Oct-2023

Summary

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Official Symbol
GSTA11Pprovided by HGNC
Official Full Name
glutathione S-transferase alpha 11, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:49905
See related
AllianceGenome:HGNC:49905
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GSTAP3
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Genomic context

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See GSTA11P in Genome Data Viewer
Location:
6p12.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (52847752..52870358, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (52687232..52709837, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (52712550..52735156, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase alpha 6, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24690 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92146 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92147 Neighboring gene glutathione S-transferase alpha 5 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92148 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92149 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92150 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92153 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:52734542-52734752 Neighboring gene uncharacterized LOC105375091 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92154 Neighboring gene glutathione S-transferase alpha 10, pseudogene Neighboring gene glutathione S-transferase alpha 3 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:52774000-52774692

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The human glutathione transferase alpha locus: genomic organization of the gene cluster and functional characterization of the genetic polymorphism in the hGSTA1 promoter. Morel F, et al. Pharmacogenetics, 2002 Jun. PMID 12042665

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • glutathione S-transferase alpha 1 pseudogene
  • glutathione S-transferase alpha 3 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_029175.3 

    Range
    101..22707
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    52847752..52870358 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    52687232..52709837 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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