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TUBBP2 tubulin beta pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 647000, updated on 10-Oct-2023

Summary

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Official Symbol
TUBBP2provided by HGNC
Official Full Name
tubulin beta pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:12415
See related
AllianceGenome:HGNC:12415
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
13q14.11
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (41383682..41385076, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (40602680..40604072, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (41957818..41959212, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene mitochondrial translation release factor 1 Neighboring gene uncharacterized LOC105370173 Neighboring gene N-alpha-acetyltransferase 16, NatA auxiliary subunit Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:41916345-41916845 Neighboring gene RNA, U6 small nuclear 57, pseudogene Neighboring gene Sharpr-MPRA regulatory region 5068 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:41995454-41995988 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:41995989-41996521 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:42009037-42009537 Neighboring gene olfactory receptor family 7 subfamily E member 36 pseudogene Neighboring gene olfactory receptor family 7 subfamily E member 155 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A contiguous linkage map of chromosome 13q with 39 distinct loci separated on average by 5.1 centimorgans. Bowcock AM, et al. Genomics, 1991 Nov. PMID 1685473
  2. FBXW7 modulates cellular stress response and metastatic potential through ​HSF1 post-translational modification. Kourtis N, et al. Nat Cell Biol, 2015 Mar. PMID 25720964, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Other Names

  • tubulin, beta polypeptide pseudogene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011428.3 

    Range
    101..1495
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    41383682..41385076 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    40602680..40604072 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases