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RPS10P13 ribosomal protein S10 pseudogene 13 [ Homo sapiens (human) ]

Gene ID: 646785, updated on 10-Oct-2023

Summary

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Official Symbol
RPS10P13provided by HGNC
Official Full Name
ribosomal protein S10 pseudogene 13provided by HGNC
Primary source
HGNC:HGNC:36374
See related
Ensembl:ENSG00000217130 AllianceGenome:HGNC:36374
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS10_8_685
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Genomic context

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Location:
6p21.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (34744140..34744718)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (34566920..34567498)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (34711917..34712495)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene inflammation and lipid regulator with UBA-like and NBR1-like domains Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17080 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17081 Neighboring gene ILRUN antisense RNA 1 Neighboring gene ATP6V1F pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:34710368-34710541 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:34724117-34724874 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:34724875-34725632 Neighboring gene small nuclear ribonucleoprotein polypeptide C Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24388 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24389 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24390 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:34759500-34760036 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24391 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24392 Neighboring gene bridge-like lipid transfer protein family member 3A Neighboring gene RNY3 pseudogene 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. Elzi DJ, et al. J Proteome Res, 2014 Aug 1. PMID 24999758, Free PMC Article
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010670.1 

    Range
    101..679
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    34744140..34744718
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    34566920..34567498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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