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IGHV1OR15-4 immunoglobulin heavy variable 1/OR15-4 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 646379, updated on 10-Oct-2023

Summary

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Official Symbol
IGHV1OR15-4provided by HGNC
Official Full Name
immunoglobulin heavy variable 1/OR15-4 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:5566
See related
IMGT/GENE-DB:IGHV1/OR15-4; AllianceGenome:HGNC:5566
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
IGHV1OR154
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Genomic context

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Location:
15q11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (22194885..22195178, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (19100480..19100773, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (22482836..22483129, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene immunoglobulin IGHV1OR15-3-like pseudogene Neighboring gene putative V-set and immunoglobulin domain-containing-like protein IGHV4OR15-8 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6255 Neighboring gene microRNA 1268a Neighboring gene uncharacterized LOC101928039

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Protein Epitope Targeted by the Antibody Response to Kawasaki Disease. Rowley AH, et al. J Infect Dis, 2020 Jun 16. PMID 32052021, Free PMC Article
  2. Human immunoglobulin VH and D segments on chromosomes 15q11.2 and 16p11.2. Tomlinson IM, et al. Hum Mol Genet, 1994 Jun. PMID 7951227

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • IGHV1/OR15-4
  • immunoglobulin heavy chain variable region

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_065963.1 

    Range
    101..394
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    22194885..22195178 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021160017.1 Reference GRCh38.p14 PATCHES

    Range
    1423454..1423747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    19100480..19100773 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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