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NAMPTP1 nicotinamide phosphoribosyltransferase pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 646309, updated on 10-Oct-2023

Summary

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Official Symbol
NAMPTP1provided by HGNC
Official Full Name
nicotinamide phosphoribosyltransferase pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:17633
See related
Ensembl:ENSG00000229644 AllianceGenome:HGNC:17633
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PBEF2; NAMPTL; bA92J19.4
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Genomic context

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Location:
10p11.21
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (36521736..36524236, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (36553055..36555555, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (36810664..36813164, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA40 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:36737868-36738406 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:36738407-36738945 Neighboring gene MT-ND4 pseudogene 18 Neighboring gene NANOG hESC enhancer GRCh37_chr10:36772950-36773451 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr10:36782803-36784002 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:37014374-37014889 Neighboring gene VISTA enhancer hs1334 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:37079549-37080050 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:37080051-37080550 Neighboring gene uncharacterized LOC105376496 Neighboring gene MAP kinase interacting serine/threonine kinase 2 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning and characterization of the cDNA encoding a novel human pre-B-cell colony-enhancing factor. Samal B, et al. Mol Cell Biol, 1994 Feb. PMID 8289818, Free PMC Article
  2. LOXL2 Upregulates Phosphorylation of Ezrin to Promote Cytoskeletal Reorganization and Tumor Cell Invasion. Zhan XH, et al. Cancer Res, 2019 Oct 1. PMID 31409639
  3. SPATA2 Links CYLD to LUBAC, Activates CYLD, and Controls LUBAC Signaling. Elliott PR, et al. Mol Cell, 2016 Sep 15. PMID 27591049, Free PMC Article
  4. Proteomic identification of common SCF ubiquitin ligase FBXO6-interacting glycoproteins in three kinds of cells. Liu B, et al. J Proteome Res, 2012 Mar 2. PMID 22268729
  5. PLEKHA4/kramer Attenuates Dishevelled Ubiquitination to Modulate Wnt and Planar Cell Polarity Signaling. Shami Shah A, et al. Cell Rep, 2019 May 14. PMID 31091453, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Other Names

  • nicotinamide phosphoribosyltransferase-like
  • pre-B-cell colony enhancing factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005593.6 

    Range
    101..2601
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    36521736..36524236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    36553055..36555555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases