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RPS27P10 ribosomal protein S27 pseudogene 10 [ Homo sapiens (human) ]

Gene ID: 646233, updated on 10-Oct-2023

Summary

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Official Symbol
RPS27P10provided by HGNC
Official Full Name
ribosomal protein S27 pseudogene 10provided by HGNC
Primary source
HGNC:HGNC:35961
See related
AllianceGenome:HGNC:35961
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS27_2_322
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Genomic context

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Location:
2q34
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (211298878..211299222, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (211779405..211779749, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (212163603..212163947, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985978 Neighboring gene 5'-nucleotidase domain containing 2 pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr2:211994958-211995459 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:212092893-212093684 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:212093685-212094476 Neighboring gene VISTA enhancer hs1578 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:212278303-212278804 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:212278805-212279304 Neighboring gene NANOG hESC enhancer GRCh37_chr2:212363277-212363781 Neighboring gene erb-b2 receptor tyrosine kinase 4 Neighboring gene RNA, 5S ribosomal pseudogene 119 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:212631258-212631794 Neighboring gene MT-ND2 pseudogene 23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009589.3 

    Range
    101..445
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    211298878..211299222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    211779405..211779749 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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