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TLK2P1 tousled like kinase 2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 646202, updated on 10-Oct-2023

Summary

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Official Symbol
TLK2P1provided by HGNC
Official Full Name
tousled like kinase 2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:18048
See related
Ensembl:ENSG00000226049 AllianceGenome:HGNC:18048
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TLK2ps1
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Genomic context

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Location:
17q12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (34036704..34040050, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (34983207..34986553, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (32363723..32367069, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene acid sensing ion channel subunit 2 Neighboring gene uncharacterized LOC124903983 Neighboring gene Sharpr-MPRA regulatory region 12358 Neighboring gene uncharacterized LOC107985038 Neighboring gene Sharpr-MPRA regulatory region 12081 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12041 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12042 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12043 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12044 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:32304983-32305483 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:32304482-32304982 Neighboring gene uncharacterized LOC107987247 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr17:32357430-32357930 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr17:32357931-32358431 Neighboring gene MPRA-validated peak2807 silencer Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr17:32370125-32371324 Neighboring gene uncharacterized LOC107985035 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12045 Neighboring gene uncharacterized LOC107985036

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_006102.6 

    Range
    101..3447
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    34036704..34040050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    34983207..34986553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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