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RPS28P7 ribosomal protein S28 pseudogene 7 [ Homo sapiens (human) ]

Gene ID: 646195, updated on 10-Oct-2023

Summary

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Official Symbol
RPS28P7provided by HGNC
Official Full Name
ribosomal protein S28 pseudogene 7provided by HGNC
Primary source
HGNC:HGNC:35787
See related
AllianceGenome:HGNC:35787
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS28_3_1160
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Genomic context

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Location:
11q14.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (82689530..82689904)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (82625974..82626346)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (82400572..82400946)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene MIR4300 host gene Neighboring gene microRNA 4300 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr11:81714171-81715370 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:81736281-81736824 Neighboring gene uncharacterized LOC105369410 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:82364504-82365004 Neighboring gene MPRA-validated peak1371 silencer Neighboring gene Sharpr-MPRA regulatory region 11396 Neighboring gene family with sequence similarity 181 member B Neighboring gene long intergenic non-protein coding RNA 2734 Neighboring gene RBMX pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005980.3 

    Range
    101..475
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    82689530..82689904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    82625974..82626346
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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