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TMEM14EP transmembrane protein 14E, pseudogene [ Homo sapiens (human) ]

Gene ID: 645843, updated on 16-Jan-2024

Summary

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Official Symbol
TMEM14EPprovided by HGNC
Official Full Name
transmembrane protein 14E, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:34386
See related
Ensembl:ENSG00000293032 AllianceGenome:HGNC:34386
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TMEM14E
Summary
Predicted to be involved in mitochondrial transport. Predicted to be integral component of membrane. Predicted to be active in mitochondrial inner membrane. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
3q25.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (152339698..152340990, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (155107599..155108891, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (152057487..152058779, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2917 Neighboring gene uncharacterized LOC101928166 Neighboring gene Sharpr-MPRA regulatory region 12239 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20704 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20705 Neighboring gene NANOG hESC enhancer GRCh37_chr3:151978898-151979587 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:151985921-151986763 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:151986764-151987605 Neighboring gene MBNL1 antisense RNA 1 Neighboring gene muscleblind like splicing regulator 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20707 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20708 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:152202190-152202395 Neighboring gene uncharacterized LOC105374163 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14826 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20709 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:152314625-152315295 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:152320355-152321049 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:152321050-152321743 Neighboring gene uncharacterized LOC102724289

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. Dias Neto E, et al. Proc Natl Acad Sci U S A, 2000 Mar 28. PMID 10737800, Free PMC Article
  2. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. Clark HF, et al. Genome Res, 2003 Oct. PMID 12975309, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Markers

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in regulation of heme biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in mitochondrial membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132656.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AW866456, AY358260
    Related
    ENST00000639378.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    152339698..152340990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    155107599..155108891 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001123228.1: Suppressed sequence

    Description
    NM_001123228.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6UXP3.1 GenPept UniProtKB/Swiss-Prot:Q6UXP3

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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