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FAM238A family with sequence similarity 238 member A [ Homo sapiens (human) ]

Gene ID: 645528, updated on 10-Oct-2023

Summary

Official Symbol
FAM238Aprovided by HGNC
Official Full Name
family with sequence similarity 238 member Aprovided by HGNC
Primary source
HGNC:HGNC:17776
See related
Ensembl:ENSG00000290444 AllianceGenome:HGNC:17776
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C10orf50; LINC00264; NCRNA00264; bA128B16.2
Expression
Restricted expression toward testis (RPKM 7.7) See more
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Genomic context

See FAM238A in Genome Data Viewer
Location:
10p12.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (26589865..26594324)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (26614600..26619068)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (26878794..26883253)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein binding family B member 1 interacting protein Neighboring gene RNA, 5S ribosomal pseudogene 307 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2236 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3169 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3170 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:26868178-26868678 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:26871445-26871944 Neighboring gene long intergenic non-protein coding RNA 3028 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:26877727-26878226 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:26882505-26883048 Neighboring gene uncharacterized LOC102724202 Neighboring gene uncharacterized LOC105376461

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • family with sequence similarity 236 member A (non-protein coding)
  • family with sequence similarity 238 member A (non-protein coding)
  • long intergenic non-protein coding RNA 264

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026793.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL160287, BC038537
    Related
    ENST00000412114.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    26589865..26594324
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    26614600..26619068
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)