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RPL7P7 ribosomal protein L7 pseudogene 7 [ Homo sapiens (human) ]

Gene ID: 644896, updated on 10-Oct-2023

Summary

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Official Symbol
RPL7P7provided by HGNC
Official Full Name
ribosomal protein L7 pseudogene 7provided by HGNC
Primary source
HGNC:HGNC:36895
See related
Ensembl:ENSG00000224315 AllianceGenome:HGNC:36895
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL7_1_7
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Genomic context

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Location:
1p36.23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (8786129..8786951, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (8319582..8320404, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (8846188..8847010, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene arginine-glutamic acid dipeptide repeats Neighboring gene small nucleolar RNA SNORA77 Neighboring gene Sharpr-MPRA regulatory region 8357 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:8658491-8658990 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 105 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 106 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 107 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 197 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 108 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 109 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 198 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:8750738-8751238 Neighboring gene Sharpr-MPRA regulatory region 13529 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 199 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 200 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:8770382-8770882 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:8781158-8781398 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:8790471-8790970 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:8791953-8792122 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 110 Neighboring gene ribosomal protein L7 pseudogene 11 Neighboring gene Sharpr-MPRA regulatory region 4622 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 201 Neighboring gene Sharpr-MPRA regulatory region 7894 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 203 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:8881999-8882222 Neighboring gene ribosomal protein L27 pseudogene Neighboring gene ribosomal protein L23a pseudogene 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005688.4 

    Range
    101..923
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    8786129..8786951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    8319582..8320404 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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