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ACTG1P19 actin gamma 1 pseudogene 19 [ Homo sapiens (human) ]

Gene ID: 644160, updated on 10-Oct-2023

Summary

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Official Symbol
ACTG1P19provided by HGNC
Official Full Name
actin gamma 1 pseudogene 19provided by HGNC
Primary source
HGNC:HGNC:51499
See related
Ensembl:ENSG00000237999 AllianceGenome:HGNC:51499
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See ACTG1P19 in Genome Data Viewer
Location:
9q31.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (100731200..100732362)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (112903192..112904354)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (103493482..103494644)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene MSANTD3-TMEFF1 readthrough Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20139 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20140 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:103254247-103254747 Neighboring gene transmembrane protein with EGF like and two follistatin like domains 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:103276664-103277164 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:103277165-103277665 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:103289773-103290326 Neighboring gene Sharpr-MPRA regulatory region 4026 Neighboring gene RN7SK pseudogene 87 Neighboring gene caveolae associated protein 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:103381338-103381838 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:103381839-103382339 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:103395478-103395729 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:103452866-103453366 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:103453367-103453867 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:103493207-103493714 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr9:103501477-103502676 Neighboring gene uncharacterized LOC105376179 Neighboring gene uncharacterized LOC105376180

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a novel actin isoform in hepatocellular carcinoma. Chang KW, et al. Hepatol Res, 2006 Sep. PMID 16824795

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021670.2 

    Range
    101..1263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    100731200..100732362
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    112903192..112904354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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