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KRT18P30 keratin 18 pseudogene 30 [ Homo sapiens (human) ]

Gene ID: 643858, updated on 10-Oct-2023

Summary

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Official Symbol
KRT18P30provided by HGNC
Official Full Name
keratin 18 pseudogene 30provided by HGNC
Primary source
HGNC:HGNC:33399
See related
AllianceGenome:HGNC:33399
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
6q14.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (85277425..85285660)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (86494852..86503086)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (85987143..85995378)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene hormonally up-regulated Neu-associated kinase pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:85877814-85878419 Neighboring gene ribosomal protein L31 pseudogene 32 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:85992886-85993121 Neighboring gene karyopherin subunit alpha 3 pseudogene Neighboring gene keratin 18 pseudogene 64 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17364 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17365 Neighboring gene long intergenic non-protein coding RNA 2535 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr6:86112847-86113639

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009655.1 

    Range
    101..8336
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    85277425..85285660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    86494852..86503086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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