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TPT1P13 TPT1 pseudogene 13 [ Homo sapiens (human) ]

Gene ID: 643421, updated on 10-Oct-2023

Summary

Official Symbol
TPT1P13provided by HGNC
Official Full Name
TPT1 pseudogene 13provided by HGNC
Primary source
HGNC:HGNC:49304
See related
AllianceGenome:HGNC:49304
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
Xq25
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (121863284..121864310, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (120163209..120164235, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (120997137..120998163, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene heat shock protein family A (Hsp70) member 8 pseudogene 1 Neighboring gene microRNA 3672 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:120936436-120936936 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:121037788-121038370 Neighboring gene UBE2V1 pseudogene 16 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:121247261-121247762 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121353508-121354124 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121354125-121354740 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121354741-121355356 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121357821-121358436 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121356589-121357204 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121355973-121356588 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:121355357-121355972 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:121360906-121361627 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121370610-121371361 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:121371648-121372847 Neighboring gene MPRA-validated peak7420 silencer Neighboring gene uncharacterized LOC101928359

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_023285.3 

    Range
    101..1127
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    121863284..121864310 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    120163209..120164235 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)