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KRT18P23 keratin 18 pseudogene 23 [ Homo sapiens (human) ]

Gene ID: 642448, updated on 10-Oct-2023

Summary

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Official Symbol
KRT18P23provided by HGNC
Official Full Name
keratin 18 pseudogene 23provided by HGNC
Primary source
HGNC:HGNC:33392
See related
Ensembl:ENSG00000215333 AllianceGenome:HGNC:33392
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
22q13.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (44566923..44568305)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (45050709..45052091)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (44962803..44964185)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44891229-44892006 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44892007-44892784 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13867 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13868 Neighboring gene retrotransposon Gag like 6 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:44923943-44924102 Neighboring gene uncharacterized LOC105373059 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44939408-44939962 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44939963-44940517 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44941073-44941626 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44946331-44946858 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44970093-44970632 Neighboring gene long intergenic non-protein coding RNA 207 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44988307-44988808 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44990461-44991156 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44991157-44991851 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:44992547-44993241 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:45003083-45003788 Neighboring gene long intergenic non-protein coding RNA 229 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:45013983-45014484 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:45015586-45016350 Neighboring gene uncharacterized LOC105373060 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:45020177-45020676

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009711.4 

    Range
    101..1483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    44566923..44568305
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    45050709..45052091
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases