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Tmem267 transmembrane protein 267 [ Mus musculus (house mouse) ]

Gene ID: 633640, updated on 5-Mar-2024

Summary

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Official Symbol
Tmem267provided by MGI
Official Full Name
transmembrane protein 267provided by MGI
Primary source
MGI:MGI:3648543
See related
Ensembl:ENSMUSG00000074634 AllianceGenome:MGI:3648543
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm7120; EG633640
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM267 (transmembrane protein 267). [provided by Alliance of Genome Resources, Apr 2022]
Annotation information
Annotation category: suggests misassembly
Expression
Biased expression in testis adult (RPKM 91.7), CNS E14 (RPKM 10.4) and 2 other tissues See more
Orthologs
human all
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Genomic context

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Location:
13 D2.3; 13 67.25 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (119624622..120071995)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (119488086..119610459)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4833420G17 gene Neighboring gene STARR-positive B cell enhancer ABC_E7292 Neighboring gene RIKEN cDNA 3110070M22 gene Neighboring gene polyadenylate binding protein-interacting protein 1 Neighboring gene STARR-seq mESC enhancer starr_35805 Neighboring gene predicted gene 9752 Neighboring gene C-C motif chemokine ligand 28 Neighboring gene predicted gene, 53794

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
  3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC29320, MGC118117

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
transmembrane protein 267
Names
transmembrane protein C5orf28 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039244.4 → NP_001034333.3  transmembrane protein 267

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) differs in the 5' UTR compared to variant 4. All four variants encode the same protein.
    Source sequence(s)
    AC163689, AC241593
    UniProtKB/Swiss-Prot
    Q3SYJ5, Q8VDR5
    UniProtKB/TrEMBL
    H3BJ86

  2. NM_001177666.3 → NP_001171137.2  transmembrane protein 267

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 4. All four variants encode the same protein.
    Source sequence(s)
    AC163689
    Consensus CDS
    CCDS56899.1
    UniProtKB/Swiss-Prot
    Q3SYJ5, Q8VDR5
    UniProtKB/TrEMBL
    H3BJ86
    Related
    ENSMUSP00000096751.5, ENSMUST00000099147.6

  3. NM_001370626.1 → NP_001357555.1  transmembrane protein 267

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 4. All four variants encode the same protein.
    Source sequence(s)
    AC163689, AC241593
    UniProtKB/Swiss-Prot
    Q3SYJ5, Q8VDR5
    UniProtKB/TrEMBL
    H3BJ86

  4. NM_001370627.1 → NP_001357556.1  transmembrane protein 267

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) represents the longest transcript. All four variants encode the same protein.
    Source sequence(s)
    AC163689, AC241593
    UniProtKB/Swiss-Prot
    Q3SYJ5, Q8VDR5
    UniProtKB/TrEMBL
    H3BJ86

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    119624622..120071995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8VDR5.1 GenPept UniProtKB/Swiss-Prot:Q8VDR5

Gene LinkOut

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