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Defb23 defensin beta 23 [ Mus musculus (house mouse) ]

Gene ID: 629114, updated on 5-Mar-2024

Summary

Official Symbol
Defb23provided by MGI
Official Full Name
defensin beta 23provided by MGI
Primary source
MGI:MGI:3644405
See related
Ensembl:ENSMUSG00000074681 AllianceGenome:MGI:3644405
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG629114
Summary
Orthologous to human DEFB129 (defensin beta 129). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward genital fat pad adult (RPKM 119.6) See more
Orthologs
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Genomic context

Location:
2 H1; 2 75.08 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (152300914..152306540, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (152459055..152464620, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 6820408C15 gene Neighboring gene predicted gene, 27343 Neighboring gene predicted gene, 39960 Neighboring gene ribosomal protein L7A pseudogene Neighboring gene STARR-seq mESC enhancer starr_06062 Neighboring gene defensin beta 20

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
beta-defensin 129
Names
beta-defensin 23

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001037933.3NP_001033022.1  beta-defensin 129 precursor

    See identical proteins and their annotated locations for NP_001033022.1

    Status: VALIDATED

    Source sequence(s)
    AL844517
    Consensus CDS
    CCDS16886.1
    UniProtKB/TrEMBL
    Q30KP0
    Related
    ENSMUSP00000096812.3, ENSMUST00000099206.3
    Conserved Domains (1) summary
    pfam13841
    Location:2654
    Defensin_beta_2; Beta defensin

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    152300914..152306540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)