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Fam124a family with sequence similarity 124, member A [ Mus musculus (house mouse) ]

Gene ID: 629059, updated on 5-Mar-2024

Summary

Official Symbol
Fam124aprovided by MGI
Official Full Name
family with sequence similarity 124, member Aprovided by MGI
Primary source
MGI:MGI:3645930
See related
Ensembl:ENSMUSG00000035184 AllianceGenome:MGI:3645930
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG629059
Summary
Orthologous to human FAM124A (family with sequence similarity 124 member A). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in CNS E18 (RPKM 13.2), whole brain E14.5 (RPKM 7.5) and 27 other tissues See more
Orthologs
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Genomic context

See Fam124a in Genome Data Viewer
Location:
14 D1; 14 33.23 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (62793186..62845935)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (62555737..62608486)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 24625 Neighboring gene small nuclear ribonucleoprotein N pseudogene Neighboring gene predicted gene, 23816 Neighboring gene serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 Neighboring gene predicted gene, 25162

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (4) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001243857.1NP_001230786.1  protein FAM124A

    Status: VALIDATED

    Source sequence(s)
    AC154516, AK137188, AW049618, BU921699
    Consensus CDS
    CCDS56963.1
    UniProtKB/TrEMBL
    D3Z5V4
    Related
    ENSMUSP00000047681.8, ENSMUST00000039064.8
    Conserved Domains (1) summary
    pfam15067
    Location:45276
    FAM124; FAM124 family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    62793186..62845935
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036158777.1XP_036014670.1  protein FAM124A isoform X1

    Conserved Domains (1) summary
    pfam15067
    Location:16247
    FAM124; FAM124 family